Publications HAL de la collection INRIA-SILICONVALLEY

2022

Journal articles

titre
Long-term Monitoring of the Sierra Nevada Snowpack Using Wireless Sensor Networks
auteur
Ziran Zhang, Steven D. Glaser, Thomas Watteyne, Sami Malek
article
IEEE Internet of Things Journal, 2022
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https://hal.inria.fr/hal-01388391/file/r1_d_zhang15american.pdf BibTex
titre
Discovering alignment relations with Graph Convolutional Networks: A biomedical case study
auteur
Pierre Monnin, Chedy Raïssi, Amedeo Napoli, Adrien Coulet
article
Semantic Web – Interoperability, Usability, Applicability, IOS Press, 2022, pp.1-20. ⟨10.3233/SW-210452⟩
Resume_court
Knowledge graphs are freely aggregated, published, and edited in the Web of data, and thus may overl .....
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https://hal.inria.fr/hal-03452182/file/sw%252F2022%252F13-3%252Fsw-13-3-sw210452%252Fsw-13-sw210452.pdf BibTex
titre
Foundational number sense training gains are predicted by hippocampal–parietal circuits
auteur
Hyesang Chang, Lang Chen, Yuan Zhang, Ye Xie, Carlo de Los Angeles, Emma Adair, Gaston Zanitti, Demian Wassermann, Miriam Rosenberg-Lee, Vinod Menon
article
Journal of Neuroscience, Society for Neuroscience, 2022, 42 (19), pp.JN-RM-1005-21. ⟨10.1523/JNEUROSCI.1005-21.2022⟩
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The development of mathematical skills in early childhood relies on number sense, the foundational a .....
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https://hal.inria.fr/hal-03670987/file/number%20sense%204wk%20prediction%20JN%20revision%202022-02-01.pdf BibTex
titre
Doubly-robust evaluation of high-dimensional surrogate markers
auteur
Denis Agniel, Boris Hejblum, Rodolphe Thiébaut, Layla Parast
article
Biostatistics, Oxford University Press (OUP), In press, ⟨10.1093/biostatistics/kxac020⟩
Resume_court
When evaluating the effectiveness of a treatment, policy, or intervention, the desired measure of ef .....
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https://hal.inria.fr/hal-03100499/file/2012.01236.pdf BibTex

2021

Journal articles

titre
Syntax-based transfer learning for the task of biomedical relation extraction
auteur
Joël Legrand, Yannick Toussaint, Chedy Raïssi, Adrien Coulet
article
Journal of Biomedical Semantics, BioMed Central, 2021, 12 (1), ⟨10.1186/s13326-021-00248-y⟩
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Abstract Background Transfer learning aims at enhancing machine learning performance on a problem by .....
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titre
PrioDeX: a Data Exchange middleware for efficient event prioritization in SDN-based IoT systems
auteur
Georgios Bouloukakis, Kyle Benson, Luca Scalzotto, Paolo Bellavista, Casey Grant, Valérie Issarny, Sharad Mehrotra, Ioannis Moscholios, Nalini Venkatasubramanian
article
ACM Transactions on Internet of Things, 2021, 2 (3), pp.1-32, Article No.: 19. ⟨10.1145/3456301⟩
Resume_court
Real-time event detection and targeted decision making for emerging mission-critical applications re .....
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https://hal.archives-ouvertes.fr/hal-03171358/file/Priodex-final.pdf BibTex

2020

Journal articles

titre
Geomstats: A Python Package for Riemannian Geometry in Machine Learning
auteur
Nina Miolane, Nicolas Guigui, Alice Le Brigant, Johan Mathe, Benjamin Hou, Yann Thanwerdas, Stefan Heyder, Olivier Peltre, Niklas Koep, Hadi Zaatiti, Hatem Hajri, Yann Cabanes, Thomas Gerald, Paul Chauchat, Christian Shewmake, Daniel Brooks, Bernhard Kainz, Claire Donnat, Susan Holmes, Xavier Pennec
article
Journal of Machine Learning Research, Microtome Publishing, 2020, 21 (223), pp.1-9
Resume_court
We introduce Geomstats, an open-source Python toolbox for computations and statistics on nonlinear m .....
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https://hal.inria.fr/hal-02536154/file/19-027.pdf BibTex
titre
QuickCal: Assisted Calibration for Crystal-Free Micro-Motes
auteur
Tengfei Chang, Thomas Watteyne, Filip Maksimovic, Brad Wheeler, David Burnett, Titan Yuan, Xavier Vilajosana, Kris Pister
article
IEEE Internet of Things Journal, In press, ⟨10.1109/JIOT.2020.3015725⟩
Resume_court
The Single Chip Micro Mote (SCµM) is a crystal-free single-chip mote that brings us one step closer .....
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https://hal.inria.fr/hal-02916810/file/chang20quickcal.pdf BibTex
titre
Accurate 3D Lighthouse Localization of a Low-Power Crystal-Free Single-Chip Mote
auteur
Brian Kilberg, Felipe M R Campos, Filip Maksimovic, Thomas Watteyne, Kristofer S J Pister
article
Journal of Microelectromechanical Systems, 2020, 29 (5), ⟨10.1109/JMEMS.2020.3011460⟩
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We present a system for centimeter-precision 3 dimensional localization of a 2×3×0.3 mm3, 5 mg, wi .....
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https://hal.inria.fr/hal-02916806/file/kilberg20accurate.pdf BibTex
titre
Microstructural organization of human insula is linked to its macrofunctional circuitry and predicts cognitive control
auteur
Vinod Menon, Guillermo Gallardo, Mark Pinsk, Van-Dang Nguyen, Jing-Rebecca Li, Weidong Cai, Demian Wassermann
article
eLife, eLife Sciences Publication, 2020, 9, ⟨10.7554/eLife.53470⟩
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The human insular cortex is a heterogeneous brain structure which plays an integrative role in guidi .....
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titre
6TiSCH on SCµM: Running a Synchronized Protocol Stack without Crystals
auteur
Tengfei Chang, Thomas Watteyne, Brad Wheeler, Filip Maksimovic, David Burnett, Osama Khan, Sahar Mesri, Lydia Lee, Ioana Suciu, Xavier Vilajosana, Kris Pister
article
Sensors, 2020, ⟨10.3390/s20071912⟩
Resume_court
We report the first time-synchronized protocol stack running on a crystal-free device. We 1 use an e .....
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https://hal.inria.fr/hal-02616355/file/chang206tisch_final.pdf BibTex
titre
dearseq: a variance component score test for RNA-Seq differential analysis that effectively controls the false discovery rate
auteur
Marine Gauthier, Denis Agniel, Rodolphe Thiébaut, Boris Hejblum
article
NAR Genomics and Bioinformatics, Oxford University Press, 2020, 2 (4), pp.lqaa093. ⟨10.1093/nargab/lqaa093⟩
Resume_court
RNA-seq studies are growing in size and popularity. We provide evidence that the most commonly used .....
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https://hal.inria.fr/hal-02138664/file/635714.full.pdf BibTex

Conference papers

titre
Knowledge-Based Matching of $n$-ary Tuples
auteur
Pierre Monnin, Miguel Couceiro, Amedeo Napoli, Adrien Coulet
article
ICCS 2020 - 25th International Conference on Conceptual Structures, Sep 2020, Bolzano / Virtual, Italy. pp.48-56, ⟨10.1007/978-3-030-57855-8_4⟩
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An increasing number of data and knowledge sources are accessible by human and software agents in th .....
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https://hal.inria.fr/hal-02493067/file/iccs-paper.pdf BibTex
titre
Tackling scalability issues in mining path patterns from knowledge graphs: a preliminary study
auteur
Pierre Monnin, Emmanuel Bresso, Miguel Couceiro, Malika Smaïl-Tabbone, Amedeo Napoli, Adrien Coulet
article
ALGOS 2020 - 1st International Conference on Algebras, Graphs and Ordered Sets, Aug 2020, Nancy, France
Resume_court
Features mined from knowledge graphs are widely used within multiple knowledge discovery tasks such .....
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https://hal.inria.fr/hal-02913224/file/kg-mining-path-patterns.pdf BibTex
titre
Atlas: Exploration and Mapping with a Sparse Swarm of Networked IoT Robots
auteur
Razanne Abu-Aisheh, Francesco Bronzino, Myriana Rifai, Brian Kilberg, Kris Pister, Thomas Watteyne
article
Wi-DroIT 2020 - Workshop on Wireless Sensors and Drones in Internet of Things, Jun 2020, Los Angeles, CA / Virtual, United States
Resume_court
Exploration and mapping is a fundamental capability of a swarm of robots: robots enter an unknown ar .....
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https://hal.inria.fr/hal-02916797/file/abu-aisheh20explore.pdf BibTex
titre
Industrial IoT with Crystal-Free Mote-on-Chip
auteur
Tengfei Chang, Timothy Claeys, Mališa Vučinić, Xavi Vilajosana, Titan Yuan, Brad Wheeler, Filip Maksimovic, David Burnett, Brian Kilberg, Kris Pister, Thomas Watteyne
article
IEEE Symposia on VLSI Technology and Circuits (VLSI), Jun 2020, Honolulu, HI / Virtual, United States
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https://hal.inria.fr/hal-02916078/file/chang20industrial.pdf BibTex
titre
Demo: 6TiSCH on SC$µ$M, Running a Synchronized Protocol Stack without Crystals
auteur
Tengfei Chang, Thomas Watteyne, Brad Wheeler, Filip Maksimovic, Osama Khan, Sahar Mesri, Lydia Lee, Kris Pister, Ioana Suciu, Xavier Vilajosana
article
EWSN 2020 - ACM International Conference on Embedded Wireless Systems and Networks, Feb 2020, Lyon, France
Resume_court
We report the first time-synchronized protocol stack running on a crystal-free device. We use an ear .....
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https://hal.inria.fr/hal-02436262/file/chang20demo_CAMERA_READY.pdf BibTex

Book sections

titre
Advances in Geometric Statistics for Manifold Dimension Reduction
auteur
Xavier Pennec
article
Handbook of Variational Methods for Nonlinear Geometric Data, Springer International Publishing, pp.339-359, 2020, ⟨10.1007/978-3-030-31351-7_11⟩
Resume_court
Geometric statistics aim at shifting the classical paradigm for inference from points in a Euclidean .....
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https://hal.inria.fr/hal-02560938/file/XP_GeomStats_ManifoldReductionPCA.pdf BibTex
titre
Introduction to differential and Riemannian geometry
auteur
Stefan Sommer, Tom Fletcher, Xavier Pennec
article
Riemannian Geometric Statistics in Medical Image Analysis, Chap. 1, Elsevier, pp.3-37, 2020, ⟨10.1016/b978-0-12-814725-2.00008-x⟩
Resume_court
This chapter introduces the basic concepts of differential geometry: Manifolds, charts, curves, thei .....
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https://hal.inria.fr/hal-02341901/file/chapter1.pdf BibTex
titre
Beyond Riemannian geometry: The affine connection setting for transformation groups
auteur
Xavier Pennec, Marco Lorenzi
article
Riemannian Geometric Statistics in Medical Image Analysis, Elsevier, pp.169-229, 2020, 978-0-12-814725-2. ⟨10.1016/B978-0-12-814725-2.00012-1⟩
Resume_court
In computational anatomy, the statistics from the object space (images, surfaces, etc.) are often li .....
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https://hal.inria.fr/hal-02342137/file/chapter5.pdf BibTex
titre
Manifold-valued image processing with SPD matrices
auteur
Xavier Pennec
article
Riemannian Geometric Statistics in Medical Image Analysis, Elsevier; Elsevier, pp.75-134, 2020, ⟨10.1016/B978-0-12-814725-2.00010-8⟩
Resume_court
Symmetric positive definite (SPD) matrices are geometric data that appear in many applications. They .....
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https://hal.inria.fr/hal-02341958/file/chapter3.pdf BibTex
titre
Bias on estimation in quotient space and correction methods: Applications to statistics on organ shapes
auteur
Nina Miolane, Loïc Devilliers, Xavier Pennec
article
Riemannian Geometric Statistics in Medical Image Analysis, Chap. 9, Elsevier, pp.343-376, 2020, ⟨10.1016/B978-0-12-814725-2.00017-0⟩
Resume_court
Riemannian geometry and the theory of quotient spaces facilitate the analysis of medical imaging alg .....
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https://hal.inria.fr/hal-02342155/file/chapterQuotient.pdf BibTex

Books

titre
Riemannian Geometric Statistics in Medical Image Analysis
auteur
Xavier Pennec, Stephan Sommer, Tom Fletcher
article
Pennec, Xavier; Sommer, Stefan; Fletcher, Tom. Academic Press; Elsevier, 2020, ⟨10.1016/C2017-0-01561-6⟩
Resume_court
Over the past 15 years, there has been a growing need in the medical image computing community for p .....
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Reports

titre
Exploration and Mapping using a Sparse Robot Swarm: Simulation Results
auteur
Razanne Abu-Aisheh, Francesco Bronzino, Myriana Rifai, Brian Kilberg, Kris Pister, Thomas Watteyne
article
[Research Report] RR-9349, Inria. 2020, pp.17
Resume_court
This research report is a companion to the following paper: Atlas: Exploration and Mapping with a Sp .....
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https://hal.inria.fr/hal-02864274/file/RR-9349.pdf BibTex

Preprints, Working Papers, ...

titre
Geometry of Sample Spaces
auteur
Philipp Harms, Peter W. Michor, Xavier Pennec, Stefan Sommer
article
2020
Resume_court
In statistics, independent, identically distributed random samples do not carry a natural ordering, .....
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https://arxiv.org/pdf/2010.08039 BibTex
titre
Quantitative modeling links in vivo microstructural and macrofunctional organization of human and macaque insular cortex, and predicts cognitive control abilities
auteur
Vinod Menon, Guillermo Gallardo, Mark Pinsk, Van-Dang Nguyen, Jing-Rebecca Li, Weidong Cai, Demian Wassermann
article
2020
Accès au texte intégral et bibtex
https://hal.inria.fr/hal-02434382/file/662601v2.full.pdf BibTex

2019

Journal articles

titre
The visual word form area (VWFA) is part of both language and attention circuitry
auteur
Lang Chen, Demian Wassermann, Daniel Abrams, John Kochalka, Guillermo Gallardo-Diez, Vinod Menon
article
Nature Communications, Nature Publishing Group, 2019, 10 (1), ⟨10.1038/s41467-019-13634-z⟩
Resume_court
While predominant models of visual word form area (VWFA) function argue for its specific role in dec .....
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https://hal.inria.fr/hal-02401938/file/s41467-019-13634-z.pdf BibTex
titre
Dynamic Channel Calibration on a Crystal-Free Mote-on-a-Chip
auteur
Ioana Suciu, Filip Maksimovic, Brad Wheeler, David Burnett, Osama Khan, Thomas Watteyne, Xavier Vilajosana, Kristofer Pister
article
IEEE Access, 2019, ⟨10.1109/ACCESS.2019.2937689⟩
Resume_court
The single chip integration of a wireless sensor node would allow for cheap, low-power, dust-size de .....
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https://hal.inria.fr/hal-02420914/file/Dynamic_Channel_Calibration_on_a_Crystal_Free_Mote_on_a_Chip.pdf BibTex
titre
6TiSCH: Industrial Performance for IPv6 Internet of Things Networks
auteur
Xavier Vilajosana, Thomas Watteyne, Malisa Vucinic, Tengfei Chang, Kristofer Pister
article
Proceedings of the IEEE, 2019, 107 (6), pp.1153 - 1165. ⟨10.1109/JPROC.2019.2906404⟩
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The convergence of operational and information technologies in the industry requires a new generatio .....
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https://hal.inria.fr/hal-02266569/file/vilajosana196tisch.pdf BibTex
titre
PGxO and PGxLOD: a reconciliation of pharmacogenomic knowledge of various provenances, enabling further comparison
auteur
Pierre Monnin, Joël Legrand, Graziella Husson, Patrice Ringot, Andon Tchechmedjiev, Clement Jonquet, Amedeo Napoli, Adrien Coulet
article
BMC Bioinformatics, BioMed Central, 2019, 20 (S4), ⟨10.1186/s12859-019-2693-9⟩
Resume_court
Background Pharmacogenomics (PGx) studies how genomic variations impact variations in drug response .....
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https://hal.inria.fr/hal-02103899/file/s12859-019-2693-9.pdf BibTex
titre
Stiffness Control of Deformable Robots Using Finite Element Modeling
auteur
Margaret Koehler, Allison M Okamura, Christian Duriez
article
IEEE Robotics and Automation Letters, 2019, 4 (2), pp.469-476. ⟨10.1109/LRA.2019.2890897⟩
Resume_court
Due to the complexity of modeling deformable materials and infinite degrees of freedom, the rich bac .....
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https://hal.inria.fr/hal-02079146/file/RALStiffnessControl.pdf BibTex
titre
A Parallel Voronoi-Based Approach for Mesoscale Simulations of Cell Aggregate Electropermeabilization
auteur
Pouria Mistani, Arthur Guittet, Clair Poignard, Frederic Gibou
article
Journal of Computational Physics, 2019, ⟨10.1016/j.jcp.2018.12.009⟩
Resume_court
We introduce a numerical framework that enables unprecedented direct numerical studies of the electr .....
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https://arxiv.org/pdf/1802.01781 BibTex
titre
Universal Social Network Bus: Towards the Federation of Heterogeneous Online Social Network Services
auteur
Rafael Angarita, Bruno Lefèvre, Shohreh Ahvar, Ehsan Ahvar, Nikolaos Georgantas, Valerie Issarny
article
ACM Transactions on Internet Technology, Association for Computing Machinery, In press, ⟨10.1145/3323333⟩
Resume_court
Online Social Network Services (OSNSs) are changing the fabric of our society, impacting almost ever .....
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https://hal.inria.fr/hal-02072544/file/Universal_Social_Network_Bus.pdf BibTex

Conference papers

titre
Symmetric Algorithmic Components for Shape Analysis with Diffeomorphisms
auteur
Nicolas Guigui, Shuman Jia, Maxime Sermesant, Xavier Pennec
article
GSI 2019 - 4th conference on Geometric Science of Information, F. Nielsen and F. Barbaresco, Aug 2019, Toulouse, France. pp.759--768, ⟨10.1007/978-3-030-26980-7_79⟩
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In computational anatomy, the statistical analysis of temporal deformations and inter-subject variab .....
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https://hal.inria.fr/hal-02148832/file/55-Guigui.pdf BibTex
titre
Is affine invariance well defined on SPD matrices? A principled continuum of metrics
auteur
Yann Thanwerdas, Xavier Pennec
article
GSI 2019 - 4th conference on Geometric Science of Information, Aug 2019, Toulouse, France. pp.502-510, ⟨10.1007/978-3-030-26980-7_52⟩
Resume_court
Symmetric Positive Definite (SPD) matrices have been widelyused in medical data analysis and a numbe .....
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https://hal.archives-ouvertes.fr/hal-02147020/file/main.pdf BibTex
titre
Exploration of Balanced Metrics on Symmetric Positive Definite Matrices
auteur
Yann Thanwerdas, Xavier Pennec
article
GSI 2019 - 4th conference on Geometric Science of Information, Aug 2019, Toulouse, France. pp.484--493, ⟨10.1007/978-3-030-26980-7_50⟩
Resume_court
Symmetric Positive Definite (SPD) matrices have been usedin many fields of medical data analysis. Ma .....
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https://hal.archives-ouvertes.fr/hal-02158525/file/Thanwerdas_GSI19_Balanced%20metrics.pdf BibTex
titre
LATTICE: A Framework for Optimizing IoT System Configurations at the Edge
auteur
Valérie Issarny, Benjamin Billet, Georgios Bouloukakis, Daniela Florescu, Cristian Toma
article
ICDCS 2019 - 39th IEEE International Conference on Distributed Computing Systems, Jul 2019, Dallas, Texas, United States
Resume_court
The Internet of Things is expected to contribute to a "smarter world" by connecting the physical to .....
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https://hal.inria.fr/hal-02161795/file/ICDCS_vision_2018.pdf BibTex
titre
A Crystal-Free Single-Chip Micro Mote with Integrated 802.15.4 Compatible Transceiver, sub-mW BLE Compatible Beacon Transmitter, and Cortex M0
auteur
Filip Maksimovic, Brad Wheeler, David Burnett, Osama Khan, Sahar Mesri, Iona Suciu, Lydia Lee, Alex Moreno, Arvind Sundararajan, Bob Zhou, Rachel Zoll, Andrew Ng, Tengfei Chang, Xavier Vilajosana, Thomas Watteyne, Ali Niknejad, Kristofer S J Pister
article
2019 VLSI - IEEE Symposium on VLSI Technology & Circuits, Jun 2019, Kyoto, Japan. ⟨10.23919/VLSIC.2019.8777971⟩
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We present an 802.15.4 compatible transceiver that operates without any off-chip frequency reference .....
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https://hal.inria.fr/hal-02420868/file/maksimovic19mrystal.pdf BibTex
titre
Knowledge Reconciliation with Graph Convolutional Networks: Preliminary Results
auteur
Pierre Monnin, Chedy Raïssi, Amedeo Napoli, Adrien Coulet
article
DL4KG2019 - Workshop on Deep Learning for Knowledge Graphs, Jun 2019, Portoroz, Slovenia
Resume_court
In this article, we investigate the task of identifying nodes that are identical, more general, or s .....
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https://hal.inria.fr/hal-02155546/file/DL4KG_PM.pdf BibTex
titre
Experimental Clock Calibration on a Crystal-Free Mote-on-a-Chip
auteur
Ioana Suciu, Filip Maksimovic, David Burnett, Osama Khan, Brad Wheeler, Arvind Sundararajan, Thomas Watteyne, Xavier Vilajosana, Kris Pister
article
IEEE INFOCOM - CNERT 2019 : International Workshop on Computer and Networking Experimental Research using Testbeds, Apr 2019, Paris, France
Resume_court
The elimination of the off-chip frequency reference,typically a crystal oscillator, would bring impo .....
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https://hal.inria.fr/hal-02266563/file/suciu19experimental.pdf BibTex
titre
Creating Fair Models of Atherosclerotic Cardiovascular Disease Risk
auteur
Stephen Pfohl, Ben Marafino, Adrien Coulet, Fatima Rodriguez, Latha Palaniappan, Nigam Shah
article
AIES '19 - Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, Jan 2019, Honolulu, United States. pp.271-278, ⟨10.1145/3306618.3314278⟩
Resume_court
Guidelines for the management of atherosclerotic cardiovascular disease (ASCVD) recommend the use of .....
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https://hal.inria.fr/hal-02388730/file/3306618.3314278.pdf BibTex

Habilitation à diriger des recherches

titre
Mises en correspondances de données, textes et connaissances pour la découverte de connaissances biomédicales
auteur
Adrien Coulet
article
Base de données [cs.DB]. Université de Lorraine, 2019
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https://hal.inria.fr/tel-02429926/file/hdr_adrien.pdf BibTex

Other publications

titre
Discovering and Comparing Relational Knowledge, the Example of Pharmacogenomics
auteur
Pierre Monnin
article
Proceedings of the EKAW Doctoral Consortium 2018 co-located with the 21st International Conference on Knowledge Engineering and Knowledge Management (EKAW 2018), 2019
Resume_court
Pharmacogenomics (PGx) studies the influence of the genome in drug response, with knowledge units of .....
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https://hal.inria.fr/hal-01955424/file/EKAWDC2018_17.pdf BibTex

Books

titre
Multimodal Brain Image Analysis and Mathematical Foundations of Computational Anatomy
auteur
Dajiang Zhu, Jingwen Yan, Heng Huang, Li Shen, Paul M. Thompson, Carl-Fredrik Westin, Xavier Pennec, Sarang Joshi, Mads Nielsen, Tom Fletcher, Stanley Durrleman, Stefan Sommer
article
Zhu, Dajiang; Yan, Jingwen; Nielsen, Mads; Fletcher, Tom; Durrleman, Stanley; Sommer, Stefan; Huang, Heng; Shen, Li; Thompson, Paul M.; Westin, Carl-Fredrik; Pennec, Xavier; Joshi, Sarang. Springer, 11846, 2019, Lecture Notes in Computer Science (LNCS), ⟨10.1007/978-3-030-33226-6⟩
Resume_court
This book constitutes the refereed joint proceedings of the 4th International Workshop on Multimodal .....
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Preprints, Working Papers, ...

titre
Curvature effects on the empirical mean in Riemannian and affine Manifolds: a non-asymptotic high concentration expansion in the small-sample regime
auteur
Xavier Pennec
article
2019
Resume_court
The asymptotic concentration of the Fréchet mean of IID random variables on a Rieman-nian manifold .....
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https://hal.inria.fr/hal-02157952/file/CurvatureAndEmpiricalFrechetMean.pdf BibTex

2018

Journal articles

titre
Moving Beyond Testbeds? Lessons (We) Learned about Connectivity
auteur
Keoma Brun-Laguna, Pedro Henrique Gomes, Thomas Watteyne, Pascale Minet
article
IEEE Pervasive Computing, 2018
Resume_court
How realistic is the connectivity in a testbed? The question determines whether a protocol that perf .....
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https://hal.inria.fr/hal-01968647/file/18_brun18moving.pdf BibTex
titre
Constructive Interference in 802.15.4: A Tutorial
auteur
Tengfei Chang, Thomas Watteyne, Xavier Vilajosana, Pedro Henrique Gomes
article
Communications Surveys and Tutorials, IEEE Communications Society, 2018
Resume_court
Constructive Interference (CI) can happen when multiple wireless devices send the same frame at the .....
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https://hal.inria.fr/hal-01968646/file/18_chang18constructive.pdf BibTex
titre
Predicting the need for a reduced drug dose, at first prescription
auteur
Adrien Coulet, Nigam H. Shah, Maxime Wack, Mohammad Chawki, Nicolas Jay, Michel Dumontier
article
Scientific Reports, Nature Publishing Group, 2018, 8 (1), ⟨10.1038/s41598-018-33980-0⟩
Resume_court
Prescribing the right drug with the right dose is a central tenet of precision medicine. We examined .....
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https://hal.inria.fr/hal-01901566/file/s41598-018-33980-0.pdf BibTex
titre
Barycentric Subspace Analysis on Manifolds
auteur
Xavier Pennec
article
Annals of Statistics, Institute of Mathematical Statistics, 2018, 46 (6A), pp.2711-2746. ⟨10.1214/17-AOS1636⟩
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This paper investigates the generalization of Principal Component Analysis (PCA) to Riemannian manif .....
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titre
Dynamical modeling of tissue electroporation
auteur
Damien Voyer, Aude Silve, Lluis M. Mir, Riccardo Scorretti, Clair Poignard
article
Bioelectrochemistry, 2018, 119, pp.98 - 110. ⟨10.1016/j.bioelechem.2017.08.007⟩
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In this paper, we propose a new dynamical model of tissue electroporation. The model is based on equ .....
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https://hal.inria.fr/hal-01598846/file/201708SourceBIOJEC7041.pdf BibTex
titre
Topologically constrained template estimation via Morse-Smale complexes controls its statistical consistency
auteur
Nina Miolane, Susan Holmes, Xavier Pennec
article
SIAM Journal on Applied Algebra and Geometry, Society for Industrial and Applied Mathematics 2018, 2 (2), pp.348-375. ⟨10.1137/17M1129222⟩
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In most neuroimaging studies, one builds a brain template that serves as a reference anatomy for nor .....
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Conference papers

titre
Handover and Load Balancing for Distributed Network Control: Applications in ITS Message Dissemination
auteur
Anuj Kaul, Li Xue, Katia Obraczka, Mateus Augusto Silva Santos, Thierry Turletti
article
ICCCN 2018 - 27th International Conference on Computer Communications and Networks, Jul 2018, Hangzhou, China
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In this paper, we build upon our prior work on D2-ITS, a flexible and extensible framework to dynami .....
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titre
Découverte d'associations entre Evénements Indésirables Médicamenteux par les structures de patrons et les ontologies
auteur
Gabin Personeni, Emmanuel Bresso, Marie-Dominique Devignes, Michel Dumontier, Malika Smaïl-Tabbone, Adrien Coulet
article
Journée I.A. et Santé, Jul 2018, Nancy, France
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On présente dans cet article une méthode d'extraction d'associations entre événements indé-sira .....
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titre
Leveraging the Power of the Crowd and Offloading Urban IoT Networks to Extend their Lifetime
auteur
Géraldine Texier, Valérie Issarny
article
LANMAN 2018 : IEEE International Symposium on Local and Metropolitan Area Networks, Jun 2018, Washington, DC, United States. pp.1-6, ⟨10.1109/LANMAN.2018.8475050⟩
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The widespread deployment of connected Things in our cities allows for the enhanced management of th .....
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titre
Matching Technological & Societal Innovations: The Social Design of a Mobile Collaborative App for Urban Noise Monitoring
auteur
Bruno Lefèvre, Valerie Issarny
article
4th IEEE International Conference on Smart Computing, Jun 2018, Taormina, Italy
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Mobile Phone Sensing offers a great opportunity toward the large scale monitoring of urban phenomena .....
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titre
Interconnecting and Monitoring Heterogeneous Things in IoT Applications
auteur
Patient Ntumba, Georgios Bouloukakis, Nikolaos Georgantas
article
International Conference on Web Engineering (ICWE), Jun 2018, Caceres, Spain
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Internet of Things (IoT) applications incorporate heterogeneous devices that employ different middle .....
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titre
A Probabilistic Model for Joint Learning of Word Embeddings from Texts and Images
auteur
Melissa Ailem, Bowen Zhang, Aurélien Bellet, Pascal Denis, Fei Sha
article
Conference on Empirical Methods in Natural Language Processing (EMNLP 2018), 2018, Brussels, Belgium
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Several recent studies have shown the benefits of combining language and perception to infer word em .....
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Other publications

titre
MOOC Défis technologiques des villes intelligentes participatives - Session 3. Contributions aux activités de fin de semaine 2 : Des vélos connectés pour de meilleures pistes cyclables et de nombreux services
auteur
Nathalie Mitton, Valérie Issarny, Aurélie Bayle
article
2018
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Poster communications

titre
Sensing Von Economo Neurons in the Insula with Multi-shell Diffusion MRI
auteur
Demian Wassermann, Dang Van Nguyen, Guillermo Gallardo, Jing-Rebecca Li, Weidong Cai, Vinod Menon
article
International Society for Magnetic Resonance in Medicine, 2018, Paris, France
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2017

Journal articles

titre
Real-time Alpine Measurement System Using Wireless Sensor Networks
auteur
Sami Malek, Francesco Avanzi, Keoma Brun-Laguna, Tessa Maurer, Carlos Oroza, Peter Hartsough, Thomas Watteyne, Steven D. Glaser
article
Sensors, 2017, 17 (11), pp.1-30. ⟨10.3390/s17112583⟩
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Monitoring the snow pack is crucial for many stakeholders, whether for hydro-power optimization, wat .....
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https://hal.inria.fr/hal-01630303/file/sensors-17-02583-v3.pdf BibTex
titre
A Machine-Learning Based Connectivity Model for Complex Terrain Large-Scale Low-Power Wireless Deployments
auteur
Carlos Oroza, Ziran Zhang, Thomas Watteyne, Steven D. Glaser
article
IEEE Transactions on Cognitive Communications and Networking, 2017
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We evaluate the accuracy of a machine-learning-based path loss model trained on 42,157,324 RSSI samp .....
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https://hal.inria.fr/hal-01571215/file/17_oroza17machine.pdf BibTex
titre
MABO-TSCH: Multi-hop And Blacklist-based Optimized Time Synchronized Channel Hopping
auteur
Pedro Henrique Gomes, Thomas Watteyne, Bhaskar Krishnamachari
article
Transactions on emerging telecommunications technologies, 2017
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titre
Teaching Communication Technologies and Standards for the Industrial IoT? Use 6TiSCH!
auteur
Thomas Watteyne, Pere Tuset, Xavier Vilajosana, Sofie Pollin, Bhaskar Krishnamachari
article
IEEE Communications Magazine, 2017, 55 (5), pp.132-137. ⟨10.1109/MCOM.2017.1700013⟩
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The IETF 6TiSCH stack encompasses IEEE802.15.4 TSCH, IETF 6LoWPAN, RPL, and CoAP. It is one of the k .....
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https://hal.inria.fr/hal-01485425/file/teaching-communication-technologies-preprint.pdf BibTex
titre
Template estimation in computational anatomy: Fréchet means in top and quotient spaces are not consistent
auteur
Loïc Devilliers, Stéphanie Allassonnière, Alain Trouvé, Xavier Pennec
article
SIAM Journal on Imaging Sciences, Society for Industrial and Applied Mathematics, 2017, 10 (3), pp.1139-1169. ⟨10.1137/16M1083931⟩
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In this article, we study the consistency of the template estimation with the Fréchet mean in quoti .....
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titre
Inconsistency of template estimation by minimizing of the variance/pre-variance in the quotient space
auteur
Loïc Devilliers, Stéphanie Allassonnière, Alain Trouvé, Xavier Pennec
article
Entropy, MDPI, 2017, 19 (6), pp.article 288. ⟨10.3390/e19060288⟩
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We tackle the problem of template estimation when data have been randomly deformed under a group act .....
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titre
Superconvergent second order Cartesian method for solving free boundary problem for invadopodia formation
auteur
Olivier Gallinato, Clair Poignard
article
Journal of Computational Physics, Elsevier, 2017, 339, pp.412 - 431. ⟨10.1016/j.jcp.2017.03.010⟩
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In this paper, we present a superconvergent second order Cartesian method to solve a free boundary p .....
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titre
Minimal IPv6 over the TSCH Mode of IEEE 802.15.4e (6TiSCH) Configuration
auteur
Xavier Vilajosana, Kris Pister, Thomas Watteyne
article
Internet Engineering Task Force RFC series, 2017, RFC8180
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This document describes a minimal mode of operation for an IPv6 over the TSCH mode of IEEE 802.15.4e .....
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titre
Spinel: An Opportunistic Proxy for Connecting Sensors to the Internet of Things
auteur
Benjamin Billet, Valérie Issarny
article
ACM Transactions on Internet Technology, 2017, 17 (2), pp.1 - 21. ⟨10.1145/3041025⟩
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Nowadays, various static wireless sensor networks (WSN) are deployed in the environment for many pur .....
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titre
A Voronoi Interface approach to cell aggregate electropermeabilization
auteur
Arthur Guittet, Clair Poignard, Frederic Gibou
article
Journal of Computational Physics, 2017, 332, pp.143 - 159. ⟨10.1016/j.jcp.2016.11.048⟩
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We present a Voronoi Interface approach to the study of cell electropermeabilization. We consider th .....
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https://hal.inria.fr/hal-01483521/file/Revision_JCP_11_21_2016.pdf BibTex
titre
Template Shape Estimation: Correcting an Asymptotic Bias
auteur
Nina Miolane, Susan Holmes, Xavier Pennec
article
SIAM Journal on Imaging Sciences, Society for Industrial and Applied Mathematics, 2017, 10 (2), pp.808 - 844. ⟨10.1137/16M1084493⟩
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We use tools from geometric statistics to analyze the usual estimation procedure of a template shape .....
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titre
Learning from biomedical linked data to suggest valid pharmacogenes
auteur
Kevin Dalleau, Yassine Marzougui, Sébastien da Silva, Patrice Ringot, Ndeye Coumba Ndiaye, Adrien Coulet
article
Journal of Biomedical Semantics, BioMed Central, 2017, 8 (1), pp.16. ⟨10.1186/s13326-017-0125-1⟩
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Background: A standard task in pharmacogenomics research is identifying genes that may be involved i .....
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https://hal.inria.fr/hal-01511773/file/dalleau_et_al_2017%20%281%29.pdf BibTex
titre
Discovering associations between adverse drug events using pattern structures and ontologies
auteur
Gabin Personeni, Emmanuel Bresso, Marie-Dominique Devignes, Michel Dumontier, Malika Smaïl-Tabbone, Adrien Coulet
article
Journal of Biomedical Semantics, BioMed Central, 2017, 93, pp.539 - 546. ⟨10.1186/s13326-017-0137-x⟩
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Background: Patient data, such as electronic health records or adverse event reporting systems, cons .....
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Conference papers

titre
Sample-limited L p Barycentric Subspace Analysis on Constant Curvature Spaces
auteur
Xavier Pennec
article
Geometric Sciences of Information (GSI 2017), Nov 2017, Paris, France. pp.20-28, ⟨10.1007/978-3-319-68445-1_3⟩
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Generalizing Principal Component Analysis (PCA) to man-ifolds is pivotal for many statistical applic .....
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titre
PGxO: A very lite ontology to reconcile pharmacogenomic knowledge units
auteur
Pierre Monnin, Clement Jonquet, Joël Legrand, Amedeo Napoli, Adrien Coulet
article
Methods, tools & platforms for Personalized Medicine in the Big Data Era, Oct 2017, Palermo, Italy. ⟨10.7287/peerj.preprints.3140v1⟩
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We present in this article a lightweight ontology named PGxO and a set of rules for its instantiatio .....
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titre
USNB: Enabling Universal Online Social Interactions
auteur
Rafael Angarita, Nikolaos Georgantas, Valérie Issarny
article
2017 IEEE 3rd International Conference on Collaboration and Internet Computing (CIC), Oct 2017, San Jose, United States. pp.309-318, ⟨10.1109/CIC.2017.00048⟩
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Abstract —Online social network services (OSNSs) have become an integral part of our daily lives. .....
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titre
Concordance between white-matter pathways and functional circuits linking the VWFA and IPS
auteur
Lang Chen, Demian Wassermann, John Kochalka, Vinod Menon
article
Organisation for the Human Brain Mapping, Jul 2017, Vancouver, Canada
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The visual word form area (VWFA) within ventral temporal-occipital cortex (VTOC) plays a crucial rol .....
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https://hal.inria.fr/hal-01558273/file/OHBM_2017_Poster_Draft_Final.pdf BibTex
titre
Expanding the Design Space of ICT for Participatory Budgeting
auteur
Cristhian Parra, Christelle Rohaut, Marianne Maeckelbergh, Valerie Issarny, James Holston
article
Communities and Technologies 2017, Jun 2017, Troyes, France
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This paper analyzes existing practices and supporting technologies for Participatory Budgeting (PB), .....
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https://hal.inria.fr/hal-01519127/file/20170430_ComTech-AppCivist-Paper-CameraReady.pdf BibTex
titre
Composing Continuous Services in a CoAP-based IoT
auteur
Benjamin Billet, Valerie Issarny, Géraldine Texier
article
AIMS - 6th IEEE International Conference on AI & Mobile Services, Jun 2017, Honolulu, United States
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We revisit core Service-Oriented Architecture –SOA– concepts to integrate advanced continuous pr .....
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https://hal.inria.fr/hal-01519132/file/composing-continuous-services.pdf BibTex
titre
Inconsistency of Template Estimation with the Fréchet mean in Quotient Space
auteur
Loïc Devilliers, Xavier Pennec, Stéphanie Allassonnière
article
Information Processing in Medical Imaging. IPMI 2017., Martin Styner; Marc Niethammer; Dinggang Shen; Stephen Aylward; Ipek Oguz; Hongtu Zhu, Jun 2017, Boone, United States. pp.16-27, ⟨10.1007/978-3-319-59050-9_2⟩
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We tackle the problem of template estimation when data have been randomly transformed under an isome .....
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https://hal.inria.fr/hal-01481074/file/IPMIversionHAL.pdf BibTex
titre
Sparse Supernodal Solver Using Block Low-Rank Compression
auteur
Grégoire Pichon, Eric Darve, Mathieu Faverge, Pierre Ramet, Jean Roman
article
18th IEEE International Workshop on Parallel and Distributed Scientific and Engineering Computing (PDSEC 2017), Jun 2017, Orlando, United States
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This paper presents two approaches using a Block Low-Rank (BLR) compression technique to reduce the .....
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titre
Leveraging the Service Bus Paradigm for Computer-mediated Social Communication Interoperability
auteur
Rafael Angarita, Nikolaos Georgantas, Cristhian Parra, James Holston, Valérie Issarny
article
International Conference on Software Engineering (ICSE), Software Engineering in Society (SEIS) Track, May 2017, Buenos Aires, Argentina
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Computer-mediated communication can be defined as any form of human communication achieved through c .....
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https://hal.inria.fr/hal-01485213/file/SocialCommunicationBus.pdf BibTex
titre
Implementation and Characterization of a Multi-hop 6TiSCH Network for Experimental Feedback Control of an Inverted Pendulum
auteur
Craig Schindler, Thomas Watteyne, Xavier Vilajosana, Kris Pister
article
WiOpt 2017 - 15th International Symposium on Modeling and Optimization in Mobile, Ad Hoc, and Wireless Networks, May 2017, Paris, France. ⟨10.23919/WIOPT.2017.7959925⟩
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6TiSCH is a technology being standardized at the IETF which brings determinism to low-power wireless .....
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titre
How Much Energy can Green HPC Cloud Users Save?
auteur
David Guyon, Anne-Cécile Orgerie, Christine Morin, Deb Agarwal
article
PDP 2017 - 25th Euromicro International Conference on Parallel, Distributed, and Network-Based Processing, Mar 2017, Saint Petersbourg, Russia
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Cloud computing has become an attractive and easy-to-use solution for users who want to externalize .....
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https://hal.inria.fr/hal-01439874/file/short-paper.pdf BibTex
titre
Sparse Supernodal Solver Using Hierarchical Compression over Runtime System
auteur
Grégoire Pichon, Eric Darve, Mathieu Faverge, Pierre Ramet, Jean Roman
article
SIAM Conference on Computation Science and Engineering (CSE'17), Feb 2017, Atlanta, United States
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In this talk, we present the PaStiX sparse supernodal solver, using hierarchical compression to redu .....
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titre
Impact of Blocking Strategies for Sparse Direct Solvers on Top of Generic Runtimes
auteur
Grégoire Pichon, Mathieu Faverge, Pierre Ramet, Jean Roman
article
SIAM Conference on Computation Science and Engineering (CSE'17), Feb 2017, Atlanta, United States
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Among the preprocessing steps of a sparse direct solver, reordering and block symbolic factorization .....
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titre
Exploiting Modern Manycore Architecture in Sparse Direct Solver with Runtime Systems
auteur
Grégoire Pichon, Mathieu Faverge, Pierre Ramet
article
SIAM Conference on Computation Science and Engineering (CSE'17), Feb 2017, Atlanta, United States
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Sparse direct solvers is a time consuming operation required by many scientific applications to simu .....
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Other publications

titre
MOOC Villes Intelligentes : défis technologiques et sociétaux - Session 2 - Contributions aux activités de fin de semaines 1 et 3 : Applications numériques au service de la ville intelligente
auteur
Nathalie Mitton, Valerie Issarny, Christelle Mariais
article
2017, pp.61
Resume_court
Ce document regroupe les contributions aux activités de fin de semaines 1 et 3 du MOOC « Défis te .....
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titre
MOOC Défis technologiques des villes intelligentes participatives Session 2. Contributions aux activités de fin de semaine 2 : Des vélos connectés pour de meilleures pistes cyclables et de nombreux services
auteur
Nathalie Mitton, Valerie Issarny, Christelle Mariais
article
2017, pp.7
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Rappel de l’énoncé de l’activité Une ville souhaite connaître la fréquentation et l’état .....
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https://hal.inria.fr/hal-01552432/file/MOOC_Villes_Int2_Act1_W2_V3.pdf BibTex
titre
MOOC Villes Intelligentes : défis technologiques et sociétaux - Session 1 - Contribution aux activités de fin de semaine 2 : des vélos connectés pour de meilleures pistes cyclables et de nombreux services
auteur
Nathalie Mitton, Valerie Issarny, Christelle Mariais
article
2017, pp.6
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Activité 1 : Des vélos connectés pour de meilleures pistes cyclables. Rappel de l’énoncé de l .....
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https://hal.inria.fr/hal-01529374/file/MOOC_Villes_Int_Act1_W2_V1.pdf BibTex
titre
MOOC Villes Intelligentes : défis technologiques et sociétaux - Session 1 - Contribution aux activités de fin de semaines 1 et 3 : un recensement de villes intelligentes et de services numériques urbains
auteur
Valerie Issarny, Nathalie Mitton, Christelle Mariais
article
2017, pp.55
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Ce document regroupe les contributions aux activités de fin de semaines 1 et 3 du MOOC « Villes in .....
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Poster communications

titre
Discovering Subsumption Axioms with Concept Annotation
auteur
Pierre Monnin, Amedeo Napoli, Adrien Coulet
article
BDA 2017 - 33ème Conférence sur la Gestion de Données — Principes, Technologies et Applications, Nov 2017, Nancy, France. Gestion de Données — Principes, Technologies et Applications (BDA 2017)
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2016

Journal articles

titre
Simple Distributed Scheduling with Collision Detection in TSCH Networks
auteur
Kazuki Muraoka, Thomas Watteyne, Nicola Accettura, Xavier Vilajosana, Kristofer Pister
article
IEEE Sensors Letters, 2016
Resume_court
The IETF IPv6 over the Time Synchronized Channel Hopping mode of IEEE 802.15.4e (6TiSCH) working gro .....
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https://hal.inria.fr/hal-01319765/file/muraoka16simple.pdf BibTex
titre
Longitudinal Analysis of Image Time Series with Diffeomorphic Deformations: A Computational Framework Based on Stationary Velocity Fields
auteur
Mehdi Hadj-Hamou, Marco Lorenzi, Nicholas Ayache, Xavier Pennec
article
Frontiers in Neuroscience, Frontiers, 2016, 10 (236), pp.18. ⟨10.3389/fnins.2016.00236⟩
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We propose and detail a deformation-based morphometry computational framework, called Longitudinal L .....
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https://hal.inria.fr/hal-01329989/file/fnins-10-00236.pdf BibTex

Conference papers

titre
Dos and Don'ts in Mobile Phone Sensing Middleware: Learning from a Large-Scale Experiment
auteur
Valerie Issarny, Vivien Mallet, Kinh Nguyen, Pierre-Guillaume Raverdy, Fadwa Rebhi, Raphael Ventura
article
ACM/IFIP/USENIX Middleware 2016, Dec 2016, Trento, Italy. ⟨10.1145/2988336.2988353⟩
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Mobile phone sensing contributes to changing the way we approach science: massive amount of data is .....
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https://hal.inria.fr/hal-01366610/file/117-issarny.pdf BibTex
titre
Insights into Frequency Diversity from Measurements on an Indoor Low Power Wireless Network Testbed
auteur
Pedro Henrique Gomes, Ying Chen, Thomas Watteyne, Bhaskar Krishnamachari
article
IEEE Global Telecommunications Conference (GLOBECOM), Workshop on Low-Layer Implementation and Protocol Design for IoT Applications (IoT-LINK), Dec 2016, Washington, DC, United States
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Recent wireless medium access control techniques, such as the Timeslotted Synchronized Channel Hoppi .....
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https://hal.inria.fr/hal-01355060/file/gomes16insights.pdf BibTex
titre
Sparse Supernodal Solver Using Hierarchical Compression
auteur
Grégoire Pichon, Eric Darve, Mathieu Faverge, Pierre Ramet, Jean Roman
article
Workshop on Fast Direct Solvers, Nov 2016, Purdue, United States
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In this talk, we present the PaStiX sparse supernodal solver, using hierarchical compression to redu .....
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titre
Barycentric Subspace Analysis: a new Symmetric Group-wise Paradigm for Cardiac Motion Tracking
auteur
Marc-Michel Rohé, Maxime Sermesant, Xavier Pennec
article
MICCAI 2016 - the 19th International Conference on Medical Image Computing and Computer Assisted Intervention, Oct 2016, Athens, Greece. pp.300-307, ⟨10.1007/978-3-319-46726-9_35⟩
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In this paper, we propose a novel approach to study cardiac motion in 4D image sequences. Whereas tr .....
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https://hal.inria.fr/hal-01373706/file/paper929.pdf BibTex
titre
Revisiting Service-oriented Architecture for the IoT: A Middleware Perspective
auteur
Valérie Issarny, Georgios Bouloukakis, Nikolaos Georgantas, Benjamin Billet
article
14th International Conference on Service Oriented Computing (ICSOC), Oct 2016, Banff, Alberta, Canada
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By bridging the physical and the virtual worlds, the Internet of Things (IoT) impacts a multitude of .....
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titre
SOL: An End-to-end Solution for Real-World Remote Monitoring Systems
auteur
Keoma Brun-Laguna, Thomas Watteyne, Sami Malek, Ziran Zhang, Carlos Oroza, Steven Glaser, Branko Kerkez
article
IEEE International Symposium on Personal, Indoor and Mobile Radio Communications (PIMRC), Sep 2016, Valencia, Spain
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This paper introduces SOL, which is both an efficient data representation for sensor measurements an .....
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titre
Functional Dependencies Unleashed for Scalable Data Exchange
auteur
Angela Bonifati, Ioana Ileana, Michele Linardi
article
International Conference on Scientific and Statistical Database Management (SSDBM), Jul 2016, Budapest, Hungary. pp.2:1-2:12, ⟨10.1145/2949689.2949698⟩
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We address the problem of efficiently evaluating target functional dependencies (fds) in the Data Ex .....
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titre
On the use of low rank approximations for sparse direct solvers
auteur
Grégoire Pichon, Eric Darve, Mathieu Faverge, Pierre Ramet, Jean Roman
article
SIAM Annual Meeting (AN'16), Jul 2016, Boston, United States
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In this talk, we describe a preliminary fast direct solver using HODLR library to compress large blo .....
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titre
Engineering Software Assemblies for Participatory Democracy: The Participatory Budgeting Use Case
auteur
James Holston, Valérie Issarny, Cristhian Parra
article
Software Engineering in Society at ICSE, May 2016, Austin, TX, United States
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The worldwide use of the Internet and social networking has transformed the constraints of time and .....
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titre
Reliability through Time-Slotted Channel Hopping and Flooding-based Routing
auteur
Pedro Henrique Gomes, Thomas Watteyne, Pradipta Gosh, Bhaskar Krishnamachari
article
International Conference on Embedded Wireless Systems and Networks (EWSN), Dependability Competition, ACM, Feb 2016, Graz, Austria
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The recent IEEE802.15.4e-2012 standard proposes medium access variants for improving the efficiency .....
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Poster communications

titre
Demo: SierraNet: Monitoring the Snowpack in the Sierra Nevada
auteur
Keoma Brun-Laguna, Carlos Oroza, Ziran Zhang, Sami Malek, Thomas Watteyne, Steven D. Glaser
article
ACM International Conference on Mobile Computing and Networking (MobiCom), Workshop on Challenged Networks (CHANTS), Oct 2016, New York City, United States. , 2016, ⟨10.1145/2979683.2979698⟩
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Next-generation hydrologic science and monitoring requires real-time, spatially distributed measurem .....
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titre
Towards a unified bayesian geometric framework for template estimation in Computational Anatomy
auteur
Nina Miolane, Xavier Pennec, Susan Holmes
article
International Society of Bayesian Analysis: World Meeting, Jun 2016, Cagliari, Italy.
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Computational Anatomy aims to model and analyze the variability of the human anatomy. Given a set of .....
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Reports

titre
Nearly optimal fast preconditioning of symmetric positive definite matrices
auteur
Emmanuel Agullo, Eric Darve, Luc Giraud, Yuval Harness
article
[Research Report] RR-8984, Inria Bordeaux Sud-Ouest. 2016, pp.34
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We consider the hierarchical off-diagonal low-rank preconditioning of symmetric positive definite ma .....
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2015

Journal articles

titre
Increasing Coverage in Distributed Search and Recommendation with Profile Diversity
auteur
Maximilien Servajean, Esther Pacitti, Miguel Liroz-Gistau, Sihem Amer-Yahia, Amr El Abbadi
article
Transactions on Large-Scale Data- and Knowledge-Centered Systems, 2015, LNCS (9430), pp.115-144. ⟨10.1007/978-3-662-48567-5_4⟩
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With the advent of Web 2.0 users are producing bigger and bigger amounts of diverse data, which are .....
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titre
Computing Bi-Invariant Pseudo-Metrics on Lie Groups for Consistent Statistics
auteur
Nina Miolane, Xavier Pennec
article
Entropy, MDPI, 2015, 17 (4), pp.1850-1881. ⟨10.3390/e17041850⟩
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In Computational Anatomy, organ’s shapes are often modelled as deformations of a reference shape, .....
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titre
Adaptive Synchronization in Multi-Hop TSCH Networks
auteur
Tengfei Chang, Thomas Watteyne, Kris Pister, Qin Wang
article
Computer Networks, 2015, 76 (C), pp.165-176. ⟨10.1016/j.comnet.2014.11.003⟩
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Time Slotted Channel Hopping (TSCH) enables highly reliable and ultra-low power wireless networking, .....
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titre
Adjoint-based optimization on a network of discretized scalar conservation law PDEs with applications to coordinated ramp metering
auteur
Jack Reilly, Walid Krichene, Maria Laura Delle Monache, Samitha Samaranayake, Paola Goatin, Alexandre Bayen
article
Journal of Optimization Theory and Applications, 2015, 167 (2), pp.733-760
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The adjoint method provides a computationally efficient means of calculating the gradient for applic .....
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Conference papers

titre
Energy-efficient User-oriented Cloud Elasticity for Data-driven Applications
auteur
David Guyon, Anne-Cécile Orgerie, Christine Morin
article
IEEE International Conference on Green Computing and Communications (GreenCom), Dec 2015, Sydney, Australia
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Nowadays enormous amounts of energy are consumed by Cloud infrastructures and this trend is still gr .....
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titre
Biased estimators on Quotient spaces
auteur
Nina Miolane, Xavier Pennec
article
Geometric Science of Information. Second International Conference, GSI 2015., Oct 2015, Palaiseau, France. pp.130-139, ⟨10.1007/978-3-319-25040-3_15⟩
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Usual statistics are defined, studied and implemented on Euclidean spaces. But what about statistics .....
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titre
Barycentric Subspaces and Affine Spans in Manifolds
auteur
Xavier Pennec
article
Geometric Science of Information GSI'2015, Second International Conference, Oct 2015, Palaiseau, France. pp.12-21, ⟨10.1007/978-3-319-25040-3_2⟩
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This paper addresses the generalization of Principal Component Analysis (PCA) to Riemannian manifold .....
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titre
A survey of mathematical structures for extending 2D neurogeometry to 3D image processing
auteur
Nina Miolane, Xavier Pennec
article
MICCAI Workshop on Medical Computer Vision: Algorithms for Big Data. MCV 2015., Oct 2015, Munich, Germany. pp.155-167, ⟨10.1007/978-3-319-42016-5_15⟩
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In the era of big data, one may apply generic learning algorithms for medical computer vision. But s .....
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titre
Barycentric Subspaces Analysis on Spheres
auteur
Xavier Pennec
article
Mathematical Foundation sof Computational Anatomy (MFCA'15), Oct 2015, Munich, Germany. pp.71-82
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This paper addresses the generalization of Principal Component Analysis (PCA) to Riemannian manifold .....
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titre
Estimating the Template in the Total Space with the Fréchet Mean on Quotient Spaces may have a Bias: a Case Study on Vector Spaces Quotiented by the Group of Translations
auteur
Stéphanie Allassonnière, Loïc Devilliers, Xavier Pennec
article
Mathematical Foundations of Computational Anatomy (MFCA'15), Oct 2015, Munich, Germany. pp.131-142
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When we have a deformation group acting on a vector space of observations, these data are not anymor .....
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titre
OpenMote: Open-Source Prototyping Platform for the Industrial IoT
auteur
Xavier Vilajosana, Pere Tuset, Thomas Watteyne, Kris Pister
article
International Conference on Ad Hoc Networks (AdHocNets), Sep 2015, San Remo, Italy. pp.211-222, ⟨10.1007/978-3-319-25067-0_17⟩
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This paper introduces OpenMote, the latest generation of Berkeley motes. OpenMote is a open-hardware .....
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titre
An Efficient Solution for Processing Skewed MapReduce Jobs
auteur
Reza Akbarinia, Miguel Liroz-Gistau, Divyakant Agrawal, Patrick Valduriez
article
Globe, Sep 2015, Valencia, Spain. pp.417-429, ⟨10.1007/978-3-319-22852-5_35⟩
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Although MapReduce has been praised for its high scalability and fault tolerance, it has been critic .....
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titre
H-matrix techniques for parallel hybrid solvers
auteur
Emmanuel Agullo, Eric Darve, Yuval Harness, Luc Giraud
article
CIMI Workshop on Fast Direct Solvers, Jun 2015, Toulouse, France
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titre
Toward Scalable Hybrid Stores
auteur
Francesca Bugiotti, Damian Bursztyn, Alin Deutsch, Ioana Ileana, Ioana Manolescu
article
SEBD Italian Symposium on Advanced Database Systems, Jun 2015, Gaeta, Italy
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Data centric applications often use heterogeneous datasets: some very large while others of moderate .....
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titre
Chiaroscuro: Transparency and Privacy for Massive Personal Time-Series Clustering
auteur
Tristan Allard, Georges Hébrail, Florent Masseglia, Esther Pacitti
article
SIGMOD: International Conference on Management of Data, May 2015, Melbourne, Australia. pp.779-794, ⟨10.1145/2723372.2749453⟩
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The advent of on-body/at-home sensors connected to personal devices leads to the generation of fine .....
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titre
Data sparse techniques for parallel hybrid solvers
auteur
Emmanuel Agullo, Eric Darve, Luc Giraud, Yuval Harness
article
SIAM Conference on Applied Linear Algebra (SIAM LA 2015), Apr 2015, Atlanta, United States
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In this talk we will describe how H-matrix data sparse techniques can be implemented in a parallel h .....
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titre
Task-Based Parallelization of the Fast Multipole Method on NVIDIA GPUs and Multicore Processors
auteur
Emmanuel Agullo, Bérenger Bramas, Olivier Coulaud, Eric Darve, Matthias Messner, Toru Takahashi
article
SIAM Conference on Computational Science and Engineering (SIAM CSE 2015), Mar 2015, Salt Lake City, United States
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Fast Multipole Methods are a fundamental operation for the simulation of many physical problems. In .....
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titre
ScalFMM: A Generic Parallel Fast Multipole Library
auteur
Pierre Blanchard, Bérenger Bramas, Olivier Coulaud, Eric Darve, Laurent Dupuy, Arnaud Etcheverry, Guillaume Sylvand
article
SIAM Conference on Computational Science and Engineering (SIAM CSE 2015), Mar 2015, Salt Lake City, United States
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ScalFMM (Parallel Fast Multipole Library for Large Scale Simulations) offers all the functionalities .....
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titre
Invisible Glue: Scalable Self-Tuning Multi-Stores
auteur
Francesca Bugiotti, Damian Bursztyn, Alin Deutsch, Ioana Ileana, Ioana Manolescu
article
Conference on Innovative Data Systems Research (CIDR), Jan 2015, Asilomar, United States
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Next-generation data centric applications often involve di-verse datasets, some very large while oth .....
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Reports

titre
Fast hierarchical algorithms for generating Gaussian random fields
auteur
Pierre Blanchard, Olivier Coulaud, Eric Darve
article
[Research Report] 8811, Inria Bordeaux Sud-Ouest. 2015
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Low-rank approximation (LRA) techniques have become crucial tools in scientific computing in order t .....
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titre
Inria@SiliconValley Activity Report 2011-2014
auteur
Valérie Issarny, Tania Castro, Helene Kirchner, Christine Morin
article
[Other] Inria. 2015, pp.1-44
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The Inria@SiliconValley Program was initiated in 2011 based on Inria collaborations with University .....
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Theses

titre
Réputation et respect de la vie privée dans les réseaux dynamiques auto-organisés
auteur
Paul Lajoie-Mazenc
article
Cryptographie et sécurité [cs.CR]. Université Rennes 1, 2015. Français. ⟨NNT : 2015REN1S039⟩
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Les mécanismes de réputation sont des outils très utiles pour inciter des utilisateurs ne se conn .....
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2014

Journal articles

titre
Software-Defined Networking Enabled Capacity Sharing in User Centric Networks
auteur
Bruno Astuto Nunes, Mateus Augusto Silva Santos, Bruno Trevizan de Oliveira, Cintia Borges Margi, Katia Obraczka, Thierry Turletti
article
IEEE Communications Magazine, 2014, 52 (9), pp.9
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In this paper, we discuss User Centric Networks (UCNs) as a way of, if not completely solving, consi .....
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titre
Characterizing RNA ensembles from NMR data with kinematic models
auteur
Rasmus Fonseca, Dimitar V Pachov, Julie Bernauer, Henry van den Bedem
article
Nucleic Acids Research, Oxford University Press, 2014, 42 (15), pp.9562-72. ⟨10.1093/nar/gku707⟩
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Functional mechanisms of biomolecules often manifest themselves precisely in transient conformationa .....
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titre
A Predictable Framework for Safety-Critical Embedded Systems
auteur
Sidharta Andalam, Partha Roop, Alain Girault, Claus Traulsen
article
IEEE Transactions on Computers, Institute of Electrical and Electronics Engineers, 2014, pp.13. ⟨10.1109/tc.2013.28⟩
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Safety-critical embedded systems, commonly found in automotive, space, and health-care, are highly r .....
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titre
Robust Analysis of cavitating flows in Venturi tube
auteur
Maria Giovanna Rodio, Pietro Marco Congedo
article
European Journal of Mechanics - B/Fluids, Elsevier, 2014, 44, pp.88-99
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titre
A PDE-ODE model for a junction with ramp buffer
auteur
Maria Laura Delle Monache, Samitha Samaranayake, Jack Reilly, Walid Krichene, Paola Goatin, Alexandre Bayen
article
SIAM Journal on Applied Mathematics, 2014, 74 (1), pp.22-39
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We consider the Lighthill-Witham-Richards traffic flow model on a junction com- posed by one mainlin .....
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titre
Vectorising Bitmaps into Semi-Transparent Gradient Layers
auteur
Christian Richardt, Jorge Lopez-Moreno, Adrien Bousseau, Maneesh Agrawala, George Drettakis
article
Computer Graphics Forum, 2014, Proceedings of Eurographics Symposium on Rendering (EGSR), 33 (4)
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We present an interactive approach for decompositing bitmap drawings and studio photographs into opa .....
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https://hal.inria.fr/hal-01060820/file/LayeredImageVectorisation-paper.pdf BibTex

Conference papers

titre
Combining Workflow Templates with a Shared Space-based Execution Model
auteur
Javier Rojas Balderrama, Matthieu Simonin, Hendrix Valerie, Lavanya Ramakrishnan, Deborah Agarwal, Christine Morin, Cédric Tedeschi
article
WORKS '14 : Proceedings of the 9th Workshop on Workflows in Support of Large-Scale Science, Nov 2014, New Orleans, United States. pp.50-58
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The growth for scientific data has led to data analysis being a critical step in the scientific proc .....
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titre
Exploiting Diversification in Distributed Recommendation
auteur
Maximilien Servajean, Esther Pacitti, Miguel Liroz-Gistau, Sihem Amer-Yahia, Amr El Abbadi
article
BDA: Gestion de Données — Principes, Technologies et Applications, IMAG, Oct 2014, Autrans, France
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Les utilisateurs du Web 2.0 sont de gros producteurs de données. Ces dernières sont stockées sur .....
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titre
Exploiting Diversification in Gossip-Based Recommendation
auteur
Maximilien Servajean, Esther Pacitti, Miguel Liroz-Gistau, Sihem Amer-Yahia, Amr El Abbadi
article
Globe, Sep 2014, Munich, Germany. pp.25-36, ⟨10.1007/978-3-319-10067-8_3⟩
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In the context of Web 2.0, the users become massive producers of diverse data that can be stored in .....
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titre
Towards an Efficient Simulation of Cavitating Flows with Real Gas Effects and Uncertainty Quantification
auteur
Maria Giovanna Rodio, Pietro Marco Congedo, Remi Abgrall
article
6th European Conference on Computational Fluid Dynamics (ECFD VI), Jul 2014, Barcelone, Spain
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titre
On the Use of High-order Statistics in Robust Design Optimization
auteur
Pietro Marco Congedo, Gianluca Geraci, Gianluca Iaccarino
article
6th European Conference on Computational Fluid Dynamics (ECFD VI), Jul 2014, Barcelone, Spain
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titre
Complete Yet Practical Search for Minimal Query Reformulations Under Constraints
auteur
Ioana Ileana, Bogdan Cautis, Alin Deutsch, Yannis Katsis
article
SIGMOD Conference 2014, Jun 2014, Snowbird, Utah, United States. ⟨10.1145/2588555.2593683⟩
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We revisit the Chase&Backchase (C&B) algorithm for query refor-mulation under constraints, which pro .....
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https://hal.inria.fr/hal-01086494/file/mod618-ileana.pdf BibTex

Book sections

titre
Storage and Data Lifecycle Management in Cloud Environments with FRIEDA
auteur
Lavanya Ramakrishnan, Devarshi Ghoshal, Val Hendrix, Eugen Feller, Pradeep Mantha, Christine Morin
article
Cloud Computing for Data Intensive Applications, Springer, 2014
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Reports

titre
Data Management Strategies for Scientific Applications in Cloud Environments
auteur
Devarshi Ghoshal, Hendrix Valerie, Eugen Feller, Christine Morin, Plale Beth, Lavanya Ramakrishnan
article
[Research Report] LBNL-6860E, Lawrence Berkeley National Laboratory, California, USA. 2014
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Clouds are increasingly being used for running dataintensive scientific applications. However, scien .....
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titre
Performance and Energy Efficiency of Big Data Applications in Cloud Environments: A Hadoop Case Study
auteur
Eugen Feller, Lavanya Ramakrishnan, Christine Morin
article
[Research Report] LBNL-6861E, Lawrence Berkeley National Laboratory, California, USA. 2014
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The exponential growth of scientic and business data has resulted in the evolution of the cloud comp .....
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2013

Journal articles

titre
Perception of Perspective Distortions in Image-Based Rendering
auteur
Peter Vangorp, Christian Richardt, Emily A. Cooper, Gaurav Chaurasia, Martin S. Banks, George Drettakis
article
ACM Transactions on Graphics, 2013, 32 (4), pp.58:1-11. ⟨10.1145/2461912.2461971⟩
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Image-based rendering (IBR) creates realistic images by enriching simple geometries with photographs .....
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titre
Depicting Stylized Materials with Vector Shade Trees
auteur
Jorge Lopez-Moreno, Popov Stefan, Adrien Bousseau, Maneesh Agrawala, George Drettakis
article
ACM Transactions on Graphics, 2013, SIGGRAPH Conference Proceedings, 32 (4)
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Vector graphics represent images with compact, editable and scalable primitives. Skillful vector art .....
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https://hal.inria.fr/hal-00828067/file/material_depiction_lowres.pdf BibTex
titre
Gloss Perception in Painterly and Cartoon Rendering
auteur
Adrien Bousseau, James P. O'Shea, Frédo Durand, Ravi Ramamoorthi, Maneesh Agrawala
article
ACM Transactions on Graphics, 2013, 32, 2, pp.18:1-18:13
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Depictions with traditional media such as painting and drawing represent scene content in a stylized .....
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Conference papers

titre
Ablation modeling with forward uncertainty analysis in Plasmatron facility
auteur
Alessandro Turchi, Pietro Marco Congedo, Thierry E. Magin
article
BOQUSE 2013, WORKSHOP on Uncertainty Quantification in fluids Simulation, Dec 2013, Bordeaux, France
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titre
Uncertainty Quantification for compressible flows
auteur
Pietro Marco Congedo
article
BOQUSE 2013, WORKSHOP on Uncertainty Quantification in fluids Simulation, Dec 2013, Bordeaux, France
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titre
Sensitivity analysis using anchored ANOVA expansion and high order moments computation
auteur
Kunkun Tang, Pietro Marco Congedo, Rémi Abgrall
article
BOQUSE 2013, WORKSHOP on Uncertainty Quantification in fluids Simulation, Dec 2013, Bordeaux, France
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titre
On the Performance and Energy Efficiency of Hadoop Deployment Models
auteur
Eugen Feller, Lavanya Ramakrishnan, Christine Morin
article
The IEEE International Conference on Big Data 2013 (IEEE BigData 2013), Oct 2013, Santa Clara, United States
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The exponential growth of scientific and business data has resulted in the evolution of the cloud co .....
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titre
Energy consumption models and predictions for large-scale systems
auteur
Taghrid Samak, Christine Morin, David H. Bailey
article
The Ninth Workshop on High-Performance, Power-Aware Computing, IEEE, May 2013, Boston, United States
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Responsible, efficient and well-planned power consumption is becoming a necessity for monetary retur .....
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titre
Pipelining the Fast Multipole Method over a Runtime System
auteur
Emmanuel Agullo, Bérenger Bramas, Olivier Coulaud, Eric Darve, Matthias Messner, Toru Takahashi
article
SIAM Conference on Computational Science and Engineering (SIAM CSE 2013), Feb 2013, Boston, United States
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Fast multipole methods (FMM) usually require a careful tuning of the algorithm for both the targeted .....
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https://hal.inria.fr/hal-00797403/file/cse.pdf BibTex

Reports

titre
Extended query language and composition for the XR data model
auteur
Alin Deutsch, François Goasdoué, Julien Leblay, Ioana Manolescu
article
[Research Report] RR-8391, INRIA. 2013
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The XR data model allows capturing rich semistructured corpora of documents (XML) with annotations ( .....
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https://hal.inria.fr/hal-00879511/file/RR-8931.pdf BibTex
titre
Task-based FMM for multicore architectures
auteur
Emmanuel Agullo, Bérenger Bramas, Olivier Coulaud, Eric Darve, Matthias Messner, Toru Takahashi
article
[Research Report] RR-8277, INRIA. 2013, pp.33
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Fast Multipole Methods (FMM) are a fundamental operation for the simulation of many physical problem .....
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https://hal.inria.fr/hal-00807368/file/RR-8277.pdf BibTex

2012

Journal articles

titre
Multiscale modeling of macromolecular biosystems.
auteur
Samuel C Flores, Julie Bernauer, Seokmin Shin, Ruhong Zhou, Xuhui Huang
article
Briefings in Bioinformatics, Oxford University Press (OUP), 2012, 13 (4), pp.395-405. ⟨10.1093/bib/bbr077⟩
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In this article, we review the recent progress in multiresolution modeling of structure and dynamics .....
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titre
Evaluating mixture models for building RNA knowledge-based potentials.
auteur
Adelene y L Sim, Olivier Schwander, Michael Levitt, Julie Bernauer
article
Journal of Bioinformatics and Computational Biology, World Scientific Publishing, 2012, 10 (2), pp.1241010. ⟨10.1142/S0219720012410107⟩
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Ribonucleic acid (RNA) molecules play important roles in a variety of biological processes. To prope .....
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https://hal.inria.fr/hal-00757761/file/EVALUATING%20MIXTURE%20MODELS%20FOR%20BUILDING%20RNAKNOWLEDGE-BASED%20POTENTIALS.pdf BibTex

Conference papers

titre
Community Access to MODIS Satellite Reprojection and Reduction Pipeline and Data Sets
auteur
Val Hendrix, Jie Li, Keith Jackson, Lavanya Ramakrishnan, Youngryel Ryu, Keith Beattie, Christine Morin, David Skinner, Catharine van Ingen, Deb Agarwal
article
AGU, 2012, San Francisco, United States
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Moderate Resolution Imaging Spectroradiometer (MODIS), the key instrument aboard NASA's Terra and Aq .....
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Book sections

titre
Adaptive strategy in multiresolution framework for uncertainty quantification
auteur
Rémi Abgrall, Pietro Marco Congedo, Gianluca Geraci, Gianluca Iaccarino
article
Proceedings of the 2012 Summer Program, Center for Turbulence Research, Stanford University, pp.209-218, 2012
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Reports

titre
Pipelining the Fast Multipole Method over a Runtime System
auteur
Emmanuel Agullo, Bérenger Bramas, Olivier Coulaud, Eric Darve, Matthias Messner, Toru Takahashi
article
[Research Report] RR-7981, INRIA. 2012, pp.24
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Fast Multipole Methods (FMM) are a fundamental operation for the simulation of many physical problem .....
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https://hal.inria.fr/hal-00703130/file/RR-7981.pdf BibTex

2011

Conference papers

titre
User- and Application-Centric Multihomed Flow Management
auteur
Olivier Mehani, Roksana Boreli, Michael Maher, Thierry Ernst
article
LCN'11 - 36th IEEE Conference on Local Computer Networks, Oct 2011, Bonn, Germany. pp.26--34, ⟨10.1109/LCN.2011.6115206⟩
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We consider the problem of network se- lection and flow distribution for a multihomed mobile device. .....
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titre
Robust optimization for uncertain dense gas flows
auteur
Pietro Marco Congedo
article
UQ Seminars - Mechanical Engineering Department - Stanford University, May 2011, Stanford, United States
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