Journal articles
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- Controlling the error on target motion through real-time mesh adaptation: applications to Deep Brain Stimulation
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- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Michel Audette, Stéphane Cotin, Stéphane P A Bordas
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- International Journal for Numerical Methods in Biomedical Engineering, 2017, pp.1-26. ⟨10.1002/cnm.2958⟩
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- An error-controlled mesh refinement procedure for needle insertion simulations is presented. As an e .....
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- Non-rigid Contour-Based Registration of Cell Nuclei in 2D Live Cell Microscopy Images Using a Dynamic Elasticity Model
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- Dmitry V Sorokin, Igor Peterlik, Marco Tektonidis, Karl Rohr, Pavel Matula
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- IEEE Transactions on Medical Imaging, 2017, 37 (1), pp.173-184. ⟨10.1109/TMI.2017.2734169⟩
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- The analysis of the pure motion of subnuclear structures without influence of the cell nucleus motio .....
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- Real-time Error Control for Surgical Simulation
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- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Stéphane Cotin, Stéphane Bordas
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- IEEE Transactions on Biomedical Engineering, 2017, pp.12
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- Objective: To present the first real-time a poste-riori error-driven adaptive finite element approac .....
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- Multiorgan Motion Tracking in Dynamic Magnetic Resonance Imaging for Evaluation of Pelvic System Mobility and Shear Strain
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- Zhifan Jiang, Jean-François Witz, Pauline Lecomte-Grosbras, Jeremie Dequidt, Stéphane Cotin, Christelle Rubod, Christian Duriez, Mathias Brieu
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- Strain, 2017, 53 (2), ⟨10.1111/str.12224⟩
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- Female pelvic disorders have a large social impact, the diagnosis of which relies on a key indicatio .....
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- Blood vessel modeling for interactive simulation of interventional neuroradiology procedures
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- Erwan Kerrien, Ahmed Yureidini, Jeremie Dequidt, Christian Duriez, René Anxionnat, Stéphane Cotin
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- Medical Image Analysis, 2017, 35, pp.685 - 698. ⟨10.1016/j.media.2016.10.003⟩
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- Endovascular interventions can benefit from interactive simulation in their training phase but also .....
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- Brain-shift compensation using intraoperative ultrasound and constraint-based biomechanical simulation
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- Fanny Morin, Hadrien Courtecuisse, Ingerid Reinertsen, Florian Le Lann, Olivier Palombi, Yohan Payan, Matthieu Chabanas
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- Medical Image Analysis, 2017, 40, pp.133 - 153. ⟨10.1016/j.media.2017.06.003⟩
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- Purpose. During brain tumor surgery, planning and guidance are based on pre-operative images which d .....
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Conference papers
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- Automatic biomechanical graph matching CT-CBCT fusion
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- Jaime Garcia Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stéphane Cotin
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- Surgetica 2017, Nov 2017, Strasbourg, France
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- Image-guided hepatic surgery is progressively becoming a standard for certain interventions. However .....
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- DejaVu: Intra-operative Simulation for Surgical Gesture Rehearsal
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- Nazim Haouchine, Danail Stoyanov, Frederick Roy, Stéphane Cotin
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- Medical Image Computing and Computer Assisted Interventions Conference MICCAI 2017, Oct 2017, Quebec City, Canada
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- Advances in surgical simulation and surgical augmented reality have changed the way surgeons prepare .....
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- Silhouette-based Pose Estimation for Deformable Organs Application to Surgical Augmented Reality
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- Yinoussa Adagolodjo, Raffaella Trivisonne, Nazim Haouchine, Stéphane Cotin, Hadrien Courtecuisse
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- IROS 2017 - IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2017, Vancouver, Canada
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- — In this paper we introduce a method for semi-automatic registration of 3D deformable models usin .....
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- An Immersed Boundary Method for Detail-Preserving Soft Tissue Simulation from Medical Images
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- Christoph J Paulus, Roland Maier, Daniel Peterseim, Stéphane Cotin
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- Computational Biomechanics for Medicine, Sep 2017, Quebec, Canada
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- Simulating the deformation of the human anatomy is a central element of Medical Image Computing and .....
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- Image-driven Stochastic Identification of Boundary Conditions for Predictive Simulation
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- Igor Peterlik, Nazim Haouchine, Lukáš Ručka, Stéphane Cotin
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- 20th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2017, Québec, Canada
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- In computer-aided interventions, biomechanical models reconstructed from the pre-operative data are .....
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- Robust Automatic Graph-based Skeletonization of Hepatic Vascular Trees
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- Rosalie Plantefève, Samuel Kadoury, An Tang, Igor Peterlik
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- CIIV STENT 2017, Sep 2017, Québec, Canada
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- The topologies of vascular trees embedded inside soft tissues carry important information which can .....
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- Real-time Error Control for Surgical Simulation
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- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Stéphane Cotin, Stéphane P A Bordas
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- BIOMECHANICS AND COMPUTER ASSISTED SURGERY MEETS MEDICAL REALITY, Aug 2017, Lille, France
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- Real-time simulations are becoming increasingly common for various applications, from geometric desi .....
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- Using Physical Modeling and RGB-D Registration for Contact Force Sensing on Deformable Objects
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- Antoine Petit, Fanny Ficuciello, Giuseppe Andrea Fontanelli, Luigi Villani, Bruno Siciliano
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- ICINCO 2017 - 14th International Conference on Informatics in Control, Automation and Robotics, IEEE, Jul 2017, Madrid, Spain. pp.24-33, ⟨10.5220/0006415900240033⟩
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- In this paper we propose a method to estimate the force applied to a manipulated deformable object b .....
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- Template-based Monocular 3D Recovery of Elastic Shapes using Lagrangian Multipliers
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- Nazim Haouchine, Stéphane Cotin
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- Computer Vision and Pattern Recognition (CVPR), Jul 2017, Honolulu, Hawai, United States
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- We present in this paper an efficient template-based method for 3D recovery of elastic shapes from a .....
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- Augmented 3D Catheter Navigation using Constrained Shape from Template
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- Raffaella Trivisonne, Erwan Kerrien, Stéphane Cotin
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- Hamlyn Symposium, Jun 2017, London, United Kingdom
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- In order to overcome the lack of depth perception in fluoroscopic images of endovascolar procedures, .....
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- Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Motile Cells with Growing Filopodia
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- Dmitry V Sorokin, Igor Peterlik, Vladimír V Ulman, David Svoboda, Martin Maška
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- International Symposium on Biomedical Imaging, Apr 2017, Melbourne, Australia
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- The existence of benchmark datasets is essential to objectively evaluate various image analysis meth .....
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- Fast reconstruction of image deformation field using radial basis function
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- Lukáš Ručka, Igor Peterlík
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- ISBI2017 - International Symposium on Biomedical Imaging, Apr 2017, Melbourne, Australia
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- Fast and accurate registration of image data is a key component of computer-aided medical image anal .....
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- Face-based Smoothed Finite Element Method for Real-time Simulation of soft tissue
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- Andrea Mendizabal, Rémi Bessard Duparc, Huu Phuoc Bui, Christoph J Paulus, Igor Peterlik, Stéphane Cotin
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- SPIE Medical Imaging, Feb 2017, Orlando, United States
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- In soft tissue surgery, a tumor and other anatomical structures are usually located using the preope .....
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Poster communications
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- Deformed Reality: Proof of concept and preliminary results
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- Nazim Haouchine, Antoine Petit, Frederick Roy, Stéphane Cotin
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- ISMAR 2017 - 16th IEEE International Symposium on Mixed and Augmented Reality, Oct 2017, Nantes, France. 2017
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- We introduce " Deformed Reality " , a new paradigm to interactively manipulate objects in a scene in .....
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Theses
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- titre
- Topological Changes in Simulations of Deformable Objects
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- Christoph Joachim Paulus
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- Modeling and Simulation. University of Strasbourg, 2017. English. ⟨NNT : ⟩
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- Virtual cutting of deformable objects is at the core of many applications in interactive simulation .....
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