Journal articles
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- titre
- A Zero-Shot Reinforcement Learning Strategy for Autonomous Guidewire Navigation
- auteur
- Valentina Scarponi, Michel Duprez, Florent Nageotte, Stéphane Cotin
- article
- International Journal of Computer Assisted Radiology and Surgery, 2024, 19, pp.1185-1192. ⟨10.1007/s11548-024-03092-4⟩
- Resume_court
- Purpose: The treatment of cardiovascular diseases requires complex and challenging navigation of a g .....
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- titre
- Augmented reality in liver surgery
- auteur
- Belkacem Acidi, Mohammed Ghallab, Stéphane Cotin, Eric Vibert, Nicolas Golse
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- Journal of Visceral Surgery, 2023, 160 (2), pp.118-126. ⟨10.1016/j.jviscsurg.2023.01.008⟩
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- During an operation, augmented reality (AR) enables surgeons to enrich their vision of the operating .....
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- titre
- Organ registration from partial surface data in augmented surgery from an optimal control perspective
- auteur
- Stéphane Cotin, Guillaume Mestdagh, Yannick Privat
- article
- Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 2023, 480, pp.20230197. ⟨10.1098/rspa.2023.0197⟩
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- We address the problem of organ registration in augmented surgery, where the deformation of the pati .....
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- titre
- Real‐Time FE Simulation for Large‐Scale Problems Using Precondition‐Based Contact Resolution and Isolated DOFs Constraints
- auteur
- Ziqiu Zeng, Stéphane Cotin, Hadrien Courtecuisse
- article
- Computer Graphics Forum, 2022, 41 (6), pp.418-434. ⟨10.1111/cgf.14563⟩
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- This paper presents a fast method to compute large-scale problems in real-time finite element simula .....
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- titre
- Model-Based Thermometry for Laser Ablation Procedure Using Kalman Filters and Sparse Temperature Measurements
- auteur
- Nava Schulmann, Mohammadamin Soltani-Sarvestani, Martina de Landro, Sanzhar Korganbayev, Stéphane Cotin, Paola Saccomandi
- article
- IEEE Transactions on Biomedical Engineering, In press, ⟨10.1109/TBME.2022.3155574⟩
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- We implement a data-assimilation Bayesian framework for the reconstruction of the spatiotemporal pro .....
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- titre
- Three‐dimensional physics‐based registration of pelvic system using 2D dynamic magnetic resonance imaging slices
- auteur
- Hadrien Courtecuisse, Zhifan Jiang, Olivier Mayeur, Jean-Francois Witz, Pauline Lecomte-Grosbras, Michel Cosson, Mathias Brieu, Stéphane Cotin
- article
- Strain, 2020, 56 (3), ⟨10.1111/str.12339⟩
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- This paper introduces a method for dynamic 3D registration of female pelvic organs using 2D dynamic .....
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- titre
- Estimation of boundary conditions for patient-specific liver simulation during augmented surgery
- auteur
- Sergei Nikolaev, Stéphane Cotin
- article
- International Journal of Computer Assisted Radiology and Surgery, 2020, 15 (7), pp.1107-1115. ⟨10.1007/s11548-020-02188-x⟩
- Resume_court
- Purpose: Augmented reality can improve the outcome of hepatic surgeries, assuming an accurate liver .....
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- titre
- Constrained Stochastic State Estimation of Deformable 1D Objects: Application to Single-view 3D Reconstruction of Catheters with Radio-opaque Markers
- auteur
- Raffaella Trivisonne, Erwan Kerrien, Stéphane Cotin
- article
- Computerized Medical Imaging and Graphics, 2020, 81, ⟨10.1016/j.compmedimag.2020.101702⟩
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- Minimally invasive fluoroscopy-based procedures are the gold standard for diagnosis and treatment of .....
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- titre
- Augmented Reality during Open Liver Surgery Using a Markerless Non-rigid Registration System
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- Nicolas Golse, Antoine Petit, Maïté Lewin, Eric Vibert, Stéphane Cotin
- article
- Journal of Gastrointestinal Surgery, 2020, ⟨10.1007/s11605-020-04519-4⟩
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- Introduction Intraoperative navigation during liver resection remains difficult and requires high ra .....
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- titre
- Elastic registration based on compliance analysis and biomechanical graph matching
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- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stéphane Cotin
- article
- Annals of Biomedical Engineering, 2020, 48, pp.447-462. ⟨10.1007/s10439-019-02364-4⟩
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- An automatic elastic registration method suited for vascularized organs is proposed. The vasculature .....
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- titre
- Force classification during robotic interventions through simulation-trained neural networks
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- Andrea Mendizabal, Raphael Sznitman, Stéphane Cotin
- article
- International Journal of Computer Assisted Radiology and Surgery, 2019, 14, pp.1601-1610. ⟨10.1007/s11548-019-02048-3⟩
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- Intravitreal injection is among the most frequent treatment strategies for chronic ophthalmic diseas .....
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- titre
- Electromagnetic Tracking for Deep Liver Targets: A preliminary feasibility study
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- Stephen Hinds, Herman Alexander Jaeger, Richard Burke, Brodie O’sullivan, Joseph Keane, Fabian Trauzettel, Bruno Marques, Stéphane Cotin, Brian Bird, Hakon Leira, Thomas Langø, Pádraig Cantillon-Murphy
- article
- International Journal of Computer Assisted Radiology and Surgery, 2019, ⟨10.1007/s11548-019-01983-5⟩
- Resume_court
- Electromagnetic tracking is a core platform technology in the navigation and visualisation of image- .....
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- titre
- Simulation of hyperelastic materials in real-time using deep learning
- auteur
- Andrea Mendizabal, Pablo Márquez-Neila, Stéphane Cotin
- article
- Medical Image Analysis, 2019, 59, pp.101569. ⟨10.1016/j.media.2019.101569⟩
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- The finite element method (FEM) is among the most commonly used numerical methods for solving engine .....
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- titre
- Quantifying the uncertainty in a hyperelastic soft tissue model with stochastic parameters
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- Paul Hauseux, Jack S. Hale, Stéphane Cotin, Stéphane P.A. Bordas
- article
- Applied Mathematical Modelling, 2018, 62, pp.86-102. ⟨10.1016/j.apm.2018.04.021⟩
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- We present a simple open-source semi-intrusive computational method to propagate uncertainties throu .....
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- titre
- Calipso: Physics-based Image and Video Editing through CAD Model Proxies
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- Nazim Haouchine, Frédérick Roy, Hadrien Courtecuisse, Matthias Niessner, Stéphane Cotin
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- The Visual Computer, 2018, 36, pp.211-226. ⟨10.1007/s00371-018-1600-0⟩
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- We present Calipso, an interactive method for editing images and videos in a physically-coherent man .....
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- titre
- Biomechanics-based graph matching for augmented CT-CBCT
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- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stephane Cotin
- article
- International Journal of Computer Assisted Radiology and Surgery, 2018, 13 (6), pp.805-813. ⟨10.1007/s11548-018-1755-1⟩
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- Purpose: Augmenting intraoperative cone beam computed tomography (CBCT) images with preoperative com .....
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- titre
- Fast Elastic Registration of Soft Tissues under Large Deformations
- auteur
- Igor Peterlik, Hadrien Courtecuisse, Robert Rohling, Purang Abolmaesumi, Christopher Nguan, Stéphane Cotin, Septimiu E Salcudean
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- Medical Image Analysis, 2018, 45, pp.24-40. ⟨10.1016/j.media.2017.12.006⟩
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- A fast and accurate fusion of intra-operative images with a pre-operative data is a key component of .....
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- titre
- Vision-based Force Feedback Estimation for Robot-assisted Surgery using Instrument-constrained Biomechanical 3D Maps
- auteur
- Nazim Haouchine, Winnie Kuang, Stéphane Cotin, Michael Yip
- article
- IEEE Robotics and Automation Letters, 2018, ⟨10.1109/LRA.2018.2810948⟩
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- We present a method for estimating visual and haptic force feedback on robotic surgical systems that .....
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- titre
- Intraoperative Biomechanical Registration of the Liver: Does the Heterogeneity of the Liver Matter?
- auteur
- Rosalie Plantefève, Igor Peterlik, Stéphane Cotin
- article
- Innovation and Research in BioMedical engineering, 2018, 39 (1), pp.18-25. ⟨10.1016/j.irbm.2017.10.005⟩
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- Background: Preoperative images such as computed tomography scans or magnetic resonance imaging cont .....
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- titre
- Controlling the error on target motion through real-time mesh adaptation: applications to Deep Brain Stimulation
- auteur
- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Michel Audette, Stéphane Cotin, Stéphane P A Bordas
- article
- International Journal for Numerical Methods in Biomedical Engineering, 2017, pp.1-26. ⟨10.1002/cnm.2958⟩
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- An error-controlled mesh refinement procedure for needle insertion simulations is presented. As an e .....
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- titre
- Real-time Error Control for Surgical Simulation
- auteur
- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Stéphane Cotin, Stéphane Bordas
- article
- IEEE Transactions on Biomedical Engineering, 2017, 95 (3), pp.596-607. ⟨10.1109/TBME.2017.2695587⟩
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- Objective: To present the first real-time a poste-riori error-driven adaptive finite element approac .....
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- titre
- Multiorgan Motion Tracking in Dynamic Magnetic Resonance Imaging for Evaluation of Pelvic System Mobility and Shear Strain
- auteur
- Zhifan Jiang, Jean-François Witz, Pauline Lecomte-Grosbras, Jeremie Dequidt, Stéphane Cotin, Christelle Rubod, Christian Duriez, Mathias Brieu
- article
- Strain, 2017, 53 (2), ⟨10.1111/str.12224⟩
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- Female pelvic disorders have a large social impact, the diagnosis of which relies on a key indicatio .....
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- titre
- Blood vessel modeling for interactive simulation of interventional neuroradiology procedures
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- Erwan Kerrien, Ahmed Yureidini, Jeremie Dequidt, Christian Duriez, René Anxionnat, Stéphane Cotin
- article
- Medical Image Analysis, 2017, 35, pp.685 - 698. ⟨10.1016/j.media.2016.10.003⟩
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- Endovascular interventions can benefit from interactive simulation in their training phase but also .....
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- titre
- Handling Topological Changes during Elastic Registration: Application to Augmented Reality in Laparoscopic Surgery
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- Christoph Joachim Paulus, Nazim Haouchine, Seong-Ho Kong, Renato Vianna Soares, David Cazier, Stéphane Cotin
- article
- International Journal of Computer Assisted Radiology and Surgery, 2016, 12, pp.461-470. ⟨10.1007/s11548-016-1502-4⟩
- Resume_court
- Purpose: Locating the internal structures of an organ is a critical aspect of many surgical procedur .....
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- titre
- Interactive Training System for Interventional Electrocardiology Procedures
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- Hugo Talbot, Federico Spadoni, Christian Duriez, Maxime Sermesant, Stéphane Cotin, Hervé Delingette
- article
- Medical Image Analysis, 2016, 8789, pp.11-19. ⟨10.1007/978-3-319-12057-7_2⟩
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- Recent progress in cardiac catheterization and devices has allowed the development of new therapies .....
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- titre
- Robust Augmented Reality registration method for Localization of Solid Organs’ Tumors Using CT-derived Virtual Biomechanical Model and Fluorescent Fiducials
- auteur
- Seong-Ho Kong, Nazim Haouchine, Renato Soares, Andrey S Klymchenko, Bohdan Andreiuk, Bruno Marques, Galyna Shabat, Thierry Piéchaud, Michele Diana, Stéphane Cotin, Jacques Marescaux
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- Surgical Endoscopy, 2016, ⟨10.1007/s00464-016-5297-8⟩
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- Accurate localization of solid organs tumors is crucial to ensure both radicality and organ function .....
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- titre
- Patient-specific Biomechanical Modeling for Guidance during Minimally-invasive Hepatic Surgery
- auteur
- Rosalie Plantefève, Igor Peterlik, Nazim Haouchine, Stéphane Cotin
- article
- Annals of Biomedical Engineering, 2015
- Resume_court
- During the minimally-invasive liver surgery, only the partial surface view of the liver is usually p .....
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- titre
- Virtual Cutting of Deformable Objects based on Efficient Topological Operations
- auteur
- Christoph Paulus, Lionel Untereiner, Hadrien Courtecuisse, Stephane Cotin, David Cazier
- article
- The Visual Computer, 2015, 31 (6-8), pp.831-841. ⟨10.1007/s00371-015-1123-x⟩
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- Virtual cutting of deformable objects is at the core of many applications in interactive simulation .....
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- titre
- Preoperative trajectory planning for percutaneous procedures in deformable environments
- auteur
- Noura Hamzé, Igor Peterlík, Stéphane Cotin, Caroline Essert
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- Computerized Medical Imaging and Graphics, 2015, 47, pp.16-28. ⟨10.1016/j.compmedimag.2015.10.002⟩
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- In image-guided percutaneous interventions, a precise planning of the needle path is a key factor to .....
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- titre
- Monocular 3D Reconstruction and Augmentation of Elastic Surfaces with Self-occlusion Handling
- auteur
- Nazim Haouchine, Jeremie Dequidt, Marie-Odile Berger, Stephane Cotin
- article
- IEEE Transactions on Visualization and Computer Graphics, 2015, pp.14. ⟨10.1109/TVCG.2015.2452905⟩
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- This paper focuses on the 3D shape recovery and augmented reality on elastic objects with self-occlu .....
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- titre
- B-spline Based Multi-organ Detection in Magnetic Resonance Imaging
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- Zhifan Jiang, Jean-Francois Witz, M Lecomte-Grosbras, Jeremie Dequidt, Christian Duriez, Michel Cosson, Stéphane Cotin, M Brieu
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- Strain, 2015, 51, pp.235 - 247. ⟨10.1111/str.12136⟩
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- In the context of the female pelvic medicine, non-invasive Magnetic Resonance Imaging (MRI) is widel .....
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Conference papers
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- titre
- Autonomous Guidewire Navigation in Dynamic Environments
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- Valentina Scarponi, François Lecomte, Michel Duprez, Florent Nageotte, Stéphane Cotin
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- International Conference on Intelligent Robots and Systems, Oct 2024, Abu Dhabi, United Arab Emirates
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- Cardiovascular disease treatment involves the challenging task of navigating guidewires and catheter .....
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- titre
- Beyond respiratory models: a physics-enhanced synthetic data generation method for 2D-3D deformable registration
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- Francois Lecomte, Pablo Alvarez, Stéphane Cotin, Jean-Louis Dillenseger
- article
- Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) Workshops, Jun 2024, Seattle (USA), Washington, United States. pp.2413-2421
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- Deformable image registration is crucial in aligning medical images for various clinical application .....
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- titre
- Deformable Image Registration with Stochastically Regularized Biomechanical Equilibrium
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- Pablo Alvarez, Stéphane Cotin
- article
- IEEE 21th International Symposium on Biomedical Imaging, Apr 2024, Athens, Greece. pp.1-5, ⟨10.1109/ISBI56570.2024.10635231⟩
- Resume_court
- Numerous regularization methods for deformable image registration aim at enforcing smooth transforma .....
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- titre
- Trackerless Volume Reconstruction from Intraoperative Ultrasound Images
- auteur
- Sidaty El hadramy, Juan Verde, Karl-Philippe Beaudet, Nicolas Padoy, Stéphane Cotin
- article
- MICCAI 2023, Oct 2023, Vancouver, Canada
- Resume_court
- This paper proposes a method for trackerless ultrasound volume reconstruction in the context of mini .....
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- titre
- Intraoperative CT augmentation for needle-based liver interventions
- auteur
- Sidaty El Hadramy, Juan Verde, Nicolas Padoy, Stéphane Cotin
- article
- MICCAI 2023, Oct 2023, Vancouver, Canada
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- This paper addresses the need for improved CT-guidance during needlebased liver procedures (i.e., tu .....
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- titre
- Enhancing Fluoroscopy-Guided Interventions: a Neural Network to Predict Vessel Deformation without Contrast Agents
- auteur
- Francois Lecomte, Valentina Scarponi, Pablo A Alvarez, Juan M Verde, Jean-Louis Dillenseger, Eric Vibert, Stéphane Cotin
- article
- The Hamlyn Symposium on Medical Robotics, Jun 2023, London, United Kingdom. pp.75-76, ⟨10.31256/HSMR2023.38⟩
- Resume_court
- Image-guided procedures have experienced a rapid in- crease in popularity in recent years. The advan .....
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- titre
- An Optimal Control Problem for Elastic Registration and Force Estimation in Augmented Surgery
- auteur
- Guillaume Mestdagh, Stéphane Cotin
- article
- MICCAI 2022 - 25th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2022, Singapore, Singapore. ⟨10.1007/978-3-031-16449-1_8⟩
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- The nonrigid alignment between a pre-operative biomechanical model and an intra-operative observatio .....
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- titre
- Unscented Kalman Filtering for Real Time Thermometry During Laser Ablation Interventions
- auteur
- Mohammadamin Soltani-Sarvestani, Stéphane Cotin, Paola Saccomandi
- article
- EMBC 2022 - International Engineering in Medicine and Biology Conference, Jul 2022, Glasgow, United Kingdom
- Resume_court
- We present a data-assimilation Bayesian framework in the context of laser ablation for the treatment .....
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- titre
- Intra-operative Update of Boundary Conditions for Patient-specific Surgical Simulation
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- Eleonora Tagliabue, Marco Piccinelli, Diego Dall'Alba, Juan Verde, Micha Pfeiffer, Riccardo Marin, Stefanie Speidel, Paolo Fiorini, Stéphane Cotin
- article
- MICCAI 2021 - 24th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2021, Strasbourg, France. pp.373-382
- Resume_court
- Patient-specific Biomechanical Models (PBMs) can enhance computer assisted surgical procedures with .....
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- titre
- Deformation Aware Augmented Reality for Craniotomy using 3D/2D Non-rigid Registration of Cortical Vessels
- auteur
- Nazim Haouchine, Parikshit Juvekar, William M Wells Iii, Stéphane Cotin, Alexandra Golby, Sarah Frisken
- article
- Medical Image Computing and Computer Assisted Intervention, Oct 2020, Lima, Peru. pp.735--744
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- Intra-operative brain shift is a well-known phenomenon that describes non-rigid deformation of brain .....
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- titre
- Use of stereo-laparoscopic liver surface reconstruction to compensate for pneumoperitoneum deformation through biomechanical modeling.
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- Andrea Teatini, Jean-Nicolas Brunet, Sergei Nikolaev, Bjørn Edwin, Stéphane Cotin, Ole Jakob Elle
- article
- VPH2020 - Virtual Physiological Human, Aug 2020, Paris, France
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- Abdominal organs undergo large deformations due to intra-abdominal pressure (pneumoperitoneum) durin .....
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- titre
- Real-Time Numerical Simulation/ From Surgical Training to Augmented reality
- auteur
- Stéphane Cotin
- article
- Séminaire du LIRIMA, Jul 2020, [En distanciel], France
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- Au cours de cette présentation, nous verrons comment les résultats récents dans le domaine de la .....
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- titre
- Estimation of boundary conditions for patient-specific liver simulation during augmented surgery
- auteur
- Sergei Nikolaev, Stéphane Cotin
- article
- IPCAI 2020 - The 11th International Conference on Information Processing in Computer-Assisted Interventions, Jun 2020, Munich, Germany. pp.1107-1115, ⟨10.1007/s11548-020-02188-x⟩
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- Purpose: Augmented reality can improve the outcome of hepatic surgeries, assuming an accurate liver .....
- Accès au texte intégral et bibtex
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- titre
- Alignment of Cortical Vessels viewed through the Surgical Microscope with Preoperative Imaging to Compensate for Brain Shift
- auteur
- Nazim Haouchine, Parikshit Juvekar, Alexandra Golby, William M Wells, Stéphane Cotin, Sarah Frisken
- article
- Medical Imaging 2020: Image-Guided Procedures, Robotic Interventions, and Modeling, Feb 2020, Houston, United States
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- Brain shift is a non-rigid deformation of brain tissue that is affected by loss of cerebrospinal flu .....
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- titre
- Physics-based Deep Neural Network for Real-Time Lesion Tracking in Ultrasound-guided Breast Biopsy
- auteur
- Andrea Mendizabal, Eleonora Tagliabue, Jean-Nicolas Brunet, Diego Dall'Alba, Paolo Fiorini, Stéphane Cotin
- article
- Computational Biomechanics for Medicine XIV, Oct 2019, Shenzhen, China
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- In the context of ultrasound (US) guided breast biopsy, image fusion techniques can be employed to t .....
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- titre
- Physics-based Deep Neural Network for Augmented Reality during Liver Surgery
- auteur
- Jean-Nicolas Brunet, Andrea Mendizabal, Antoine Petit, Nicolas Golse, Eric Vibert, Stéphane Cotin
- article
- MICCAI 2019 - 22nd International Conference on Medical Image Computing and Computer Assisted Intervention, Oct 2019, Shenzhen, China. pp.8, ⟨10.1007/978-3-030-32254-0_16⟩
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- In this paper we present an approach combining a finite element method and a deep neural network to .....
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- titre
- Deformed Reality
- auteur
- Antoine Petit, Nazim Haouchine, Frédérick Roy, Dan B Goldman, Stéphane Cotin
- article
- Computer Graphics & Visual Computing (Eurographics), Sep 2019, Bangor, United Kingdom
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- We present Deformed Reality, a new way of interacting with an augmented reality environment by manip .....
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- titre
- The effect of discretization on parameter identification. Application to patient-specific simulations
- auteur
- Nava Weingort Schulmann, Stéphane Cotin, Igor Peterlík
- article
- CMBBE 2019 - 16th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering, Aug 2019, New York (NY), United States
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- Identifying the elastic parameters of a finite element model from a dynamically acquired set of obse .....
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- titre
- Corotated meshless implicit dynamics for deformable bodies
- auteur
- Jean-Nicolas Brunet, Vincent Magnoux, Benoît Ozell, Stéphane Cotin
- article
- WSCG 2019 - 27th International Conference on Computer Graphics, Visualization and Computer Vision, May 2019, Pilsen, Czech Republic. ⟨10.24132/CSRN.2019.2901.1.11⟩
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- This paper proposes a fast, stable and accurate meshless method to simulate geometrically non-linear .....
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- titre
- Environment-aware non-rigid registration in surgery using physics-based simulation
- auteur
- Antoine Petit, Stéphane Cotin
- article
- ACCV 2018 - 14th Asian Conference on Computer Vision, Dec 2018, Perth, Australia
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- This paper presents a system for capturing the deformations of soft objects undergoing elastic defor .....
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- titre
- Capturing Deformations of Interacting Non-rigid Objects Using RGB-D Data
- auteur
- Antoine Petit, Stéphane Cotin, Vincenzo Lippiello, Bruno Siciliano
- article
- IROS 2018 - IEEE/RSJ International Conference on Intelligent Robots and Systems, Oct 2018, Madrid, Spain
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- This paper presents a method for tracking multiple interacting deformable objects undergoing rigid m .....
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- titre
- Stochastic Correction of Boundary Conditions during Liver Surgery
- auteur
- Sergei Nikolaev, Igor Peterlik, Stéphane Cotin
- article
- CVCS 2018 - 9th Colour and Visual Computing Symposium 2018, NTNU: Norwegian University of Science and Technology, Sep 2018, Gjovik, Norway. pp.1 - 4, ⟨10.1109/CVCS.2018.8496720⟩
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- Boundary conditions play essential role in forming the predictive capacity of the biomechanical mode .....
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- titre
- A Combined Simulation & Machine Learning Approach for Image-based Force Classification during Robotized Intravitreal Injections
- auteur
- Andrea Mendizabal, Tatiana Fountoukidou, Jan Hermann, Raphael Sznitman, Stéphane Cotin
- article
- Medical Image Computing and Computer Assisted Interventions Conference, Sep 2018, Granada, Spain
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- Intravitreal injection is one of the most common treatment strategies for chronic ophthalmic disease .....
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- titre
- Biomechanics-based graph matching for augmented CT-CBCT
- auteur
- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stephane Cotin
- article
- IPCAI 2018 - 9th International Conference on Information Processing in Computer-Assisted Interventions, Jun 2018, Berlin, Germany
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- Purpose: Augmenting intraoperative cone beam computed tomography (CBCT) images with preoperative com .....
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- titre
- Marker-based Registration for Large Deformations -Application to Open Liver Surgery
- auteur
- Yinoussa Adagolodjo, Nicolas Golse, Eric Vibert, Michel de Mathelin, Stéphane Cotin, Hadrien Courtecuisse, Yinoussa Adagolodjo
- article
- ICRA 2018 - International Conference on Robotics and Automation, May 2018, Brisbane, Australia
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- This paper introduces an Augmented Reality (AR) system for open liver surgery. Although open surgery .....
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- titre
- Automatic biomechanical graph matching CT-CBCT fusion
- auteur
- Jaime Garcia Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stéphane Cotin
- article
- Surgetica 2017, Nov 2017, Strasbourg, France
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- Image-guided hepatic surgery is progressively becoming a standard for certain interventions. However .....
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- titre
- DejaVu: Intra-operative Simulation for Surgical Gesture Rehearsal
- auteur
- Nazim Haouchine, Danail Stoyanov, Frederick Roy, Stéphane Cotin
- article
- Medical Image Computing and Computer Assisted Interventions Conference MICCAI 2017, Oct 2017, Quebec City, Canada
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- Advances in surgical simulation and surgical augmented reality have changed the way surgeons prepare .....
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- titre
- Silhouette-based Pose Estimation for Deformable Organs Application to Surgical Augmented Reality
- auteur
- Yinoussa Adagolodjo, Raffaella Trivisonne, Nazim Haouchine, Stéphane Cotin, Hadrien Courtecuisse, Yinoussa Adagolodjo
- article
- IROS 2017 - IEEE/RSJ International Conference on Intelligent Robots and Systems, Sep 2017, Vancouver, Canada
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- — In this paper we introduce a method for semi-automatic registration of 3D deformable models usin .....
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- titre
- An Immersed Boundary Method for Detail-Preserving Soft Tissue Simulation from Medical Images
- auteur
- Christoph J Paulus, Roland Maier, Daniel Peterseim, Stéphane Cotin
- article
- Computational Biomechanics for Medicine, Sep 2017, Quebec, Canada
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- Simulating the deformation of the human anatomy is a central element of Medical Image Computing and .....
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- titre
- Image-driven Stochastic Identification of Boundary Conditions for Predictive Simulation
- auteur
- Igor Peterlik, Nazim Haouchine, Lukáš Ručka, Stéphane Cotin
- article
- 20th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2017, Québec, Canada
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- In computer-aided interventions, biomechanical models reconstructed from the pre-operative data are .....
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- titre
- Real-time Error Control for Surgical Simulation
- auteur
- Huu Phuoc Bui, Satyendra Tomar, Hadrien Courtecuisse, Stéphane Cotin, Stéphane P A Bordas
- article
- BIOMECHANICS AND COMPUTER ASSISTED SURGERY MEETS MEDICAL REALITY, Aug 2017, Lille, France
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- Real-time simulations are becoming increasingly common for various applications, from geometric desi .....
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- titre
- Template-based Monocular 3D Recovery of Elastic Shapes using Lagrangian Multipliers
- auteur
- Nazim Haouchine, Stéphane Cotin
- article
- Computer Vision and Pattern Recognition (CVPR), Jul 2017, Honolulu, Hawai, United States
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- We present in this paper an efficient template-based method for 3D recovery of elastic shapes from a .....
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- titre
- Augmented 3D Catheter Navigation using Constrained Shape from Template
- auteur
- Raffaella Trivisonne, Erwan Kerrien, Stéphane Cotin
- article
- Hamlyn Symposium, Jun 2017, London, United Kingdom
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- In order to overcome the lack of depth perception in fluoroscopic images of endovascolar procedures, .....
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- titre
- Face-based Smoothed Finite Element Method for Real-time Simulation of soft tissue
- auteur
- Andrea Mendizabal, Rémi Bessard Duparc, Huu Phuoc Bui, Christoph J Paulus, Igor Peterlik, Stéphane Cotin
- article
- SPIE Medical Imaging, Feb 2017, Orlando, United States
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- In soft tissue surgery, a tumor and other anatomical structures are usually located using the preope .....
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- titre
- Using Contours as Boundary Conditions for Elastic Registration during Minimally Invasive Hepatic Surgery
- auteur
- Nazim Haouchine, Frederick Roy, Lionel Untereiner, Stéphane Cotin
- article
- International Conference on Intelligent Robots and Systems, Oct 2016, Daejeon, South Korea
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- We address in this paper the ill-posed problem of initial alignment of pre-operative to intra-operat .....
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- titre
- Simultaneous Pose Estimation and Augmentation of Elastic Surfaces from a Moving Monocular Camera
- auteur
- Nazim Haouchine, Marie-Odile Berger, Stephane Cotin
- article
- International Symposium on Mixed and Augmented Reality, Sep 2016, Merida, Mexico
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- We present in this paper an original method to estimate the pose of a monocular camera while simulta .....
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- titre
- Segmentation and Labelling of Intra-operative Laparoscopic Images using Structure from Point Cloud
- auteur
- Nazim Haouchine, Stephane Cotin
- article
- International Symposium on Biomedical Imaging : "From Nano to Macro" (ISBI 2016), Apr 2016, Prague, Czech Republic
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- We present in this paper an automatic method for segmenting and labelling of liver its surrounding t .....
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- titre
- 3D Physics-Based Registration of 2D Dynamic MRI Data
- auteur
- Raffaella Trivisonne, Igor Peterlik, Stéphane Cotin, Hadrien Courtecuisse
- article
- MMVR - Medicine Meets Virtual Reality, Apr 2016, Los Angeles, United States
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- We present a method allowing for intra-operative targeting of a specific anatomical feature. The met .....
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- titre
- Framework for augmented reality in Minimally Invasive laparoscopic surgery
- auteur
- Bruno Marques, Rosalie Plantefeve, Frédérick Roy, Nazim Haouchine, Emmanuel Jeanvoine, Igor Peterlik, Stéphane Cotin
- article
- HealthCom 2015, Oct 2015, Boston, United States. ⟨10.1109/HealthCom.2015.7454467⟩
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- This article presents a framework for fusing pre-operative data and intra-operative data for surgery .....
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- titre
- Surgical Augmented Reality with Topological Changes
- auteur
- Christoph J. Paulus, Nazim Haouchine, David Cazier, Stéphane Cotin
- article
- Medical Image Computing and Computer Assisted Interventions, Oct 2015, München, Germany
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- The visualization of internal structures of organs in minimally invasive surgery is an important ave .....
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- titre
- Augmented Reality during Cutting and Tearing of Deformable Objects
- auteur
- Christoph J. Paulus, Nazim Haouchine, David Cazier, Stephane Cotin
- article
- The 14th IEEE International Symposium on Mixed and Augmented Reality, Sep 2015, Fukuoka, Japan. pp.6
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- Current methods dealing with non-rigid augmented reality only provide an augmented view when the top .....
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- titre
- Anticipation of Brain Shift in Deep Brain Stimulation Automatic Planning
- auteur
- Noura Hamzé, Alexandre Bilger, Christian Duriez, Stéphane Cotin, Caroline Essert
- article
- IEEE Engineering in Medicine and Biology Society (EMBC’15), Aug 2015, Milan, Italy. pp.3635 - 3638 ⟨10.1109/EMBC.2015.7319180⟩
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- Deep Brain Stimulation is a neurosurgery procedure consisting in implanting an electrode in a deep s .....
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- titre
- Personalization of Cardiac Electrophysiology Model using the Unscented Kalman Filtering
- auteur
- Hugo Talbot, Stephane Cotin, Reza Razavi, Christopher Rinaldi, Hervé Delingette
- article
- Computer Assisted Radiology and Surgery (CARS 2015), Jun 2015, Barcelona, Spain
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- Cardiac electrophysiology mapping techniques now allow to record denser intra-operative electrograms .....
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- titre
- Virtual Cutting of Deformable Objects based on Efficient Topological Operations
- auteur
- Christoph Paulus, Lionel Untereiner, Hadrien Courtecuisse, Stéphane Cotin, David Cazier
- article
- Computer Graphics International, Jun 2015, Strasbourg, France
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- Virtual cutting of deformable objects is at the core of many applications in interactive simulation .....
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Book sections
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- titre
- φ-FEM: an efficient simulation tool using simple meshes for problems in structure mechanics and heat transfer
- auteur
- Stéphane Cotin, Michel Duprez, Vanessa Lleras, Alexei Lozinski, Killian Vuillemot
- article
- Stéphane Bordas; Alexander Menk; Sundararajan Natarajan. Partition of Unity Methods, Wiley, pp.191-216, 2022, Wiley Series in Computational Mechanics, 978-0470667088. ⟨10.1002/9781118535875.ch7⟩
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- One of the major issues in the computational mechanics is to take into account the geometrical compl .....
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- titre
- Data-driven simulation for augmented surgery
- auteur
- Andrea Mendizabal, Eleonora Tagliabue, Tristan Hoellinger, Jean-Nicolas Brunet, Sergei Nikolaev, Stéphane Cotin
- article
- Bilen Emek Abali; Ivan Giorgio. Developments and Novel Approaches in Biomechanics and Metamaterials, 132, Springer, pp.71-96, 2020, Advanced Structured Materials, 978-3-030-50464-9. ⟨10.1007/978-3-030-50464-9_5⟩
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- To build an augmented view of an organ during surgery, it is essential to have a biomechanical model .....
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- titre
- New applications
- auteur
- Bruno Arnaldi, Stéphane Cotin, Nadine Couture, Jean-Louis Dautin, Valérie Gouranton, Francois Gruson, Domitile Lourdeaux
- article
- Virtual Reality and Augmented Reality - Myths and Realities, chapter 1, wiley, pp.1-71, 2018, 978-1-786-30105-5. ⟨10.1002/9781119341031.ch1⟩
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- This chapter gives an overview of the new families of applications that have emerged or that have un .....
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Other publications
- titre
- Information Processing in Computer-Assisted Interventions: 4th International Conference, 2013
- auteur
- Dean Barratt, Pierre Jannin, Gabor Fichtinger, Stéphane Cotin
- article
- 2014
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Poster communications
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- titre
- Deformed Reality: Proof of concept and preliminary results
- auteur
- Nazim Haouchine, Antoine Petit, Frederick Roy, Stéphane Cotin
- article
- ISMAR 2017 - 16th IEEE International Symposium on Mixed and Augmented Reality, Oct 2017, Nantes, France. 2017
- Resume_court
- We introduce " Deformed Reality " , a new paradigm to interactively manipulate objects in a scene in .....
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Proceedings
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- titre
- HyperU-Mesh: Real-time deformation of soft-tissues across variable patient-specific parameters
- auteur
- Sidaty El Hadramy, Nicolas Padoy, Stéphane Cotin
- article
- Computational Biomechanics Workshop at MICCAI 2024, 2024
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- Physics-based Patient-Specific Biomechanical models (PSBMs), particularly those using finite element .....
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- titre
- TOWARDS REAL-TIME VESSEL GUIDED AUGMENTED REALITY FOR LIVER SURGERY
- auteur
- Sidaty EL HADRAMY, Juan Verde, Nicolas Padoy, Stéphane Cotin
- article
- IEEE International Symposium on Biomedical Imaging (ISBI 2024), 2024
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- This work presents a novel method for augmented reality in liver surgery. Leveraging advanced recons .....
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Preprints, Working Papers, ...
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- titre
- CNN-based real-time 2D-3D deformable registration from a single X-ray projection
- auteur
- François Lecomte, Jean-Louis Dillenseger, Stéphane Cotin
- article
- 2023
- Resume_court
- Purpose: The purpose of this paper is to present a method for realtime 2D-3D non-rigid registration .....
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- titre
- DeepPhysics: a physics aware deep learning framework for real-time simulation
- auteur
- Alban Odot, Ryadh Haferssas, Stéphane Cotin
- article
- 2023
- Resume_court
- Real-time simulation of elastic structures is essential in many applications, from computer-guided s .....
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- titre
- Real-time elastic partial shape matching using a neural network-based adjoint method
- auteur
- Alban Odot, Guillaume Mestdagh, Yannick Privat, Stéphane Cotin
- article
- 2022
- Resume_court
- Surface matching usually provides significant deformations that can lead to structural failure due t .....
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- titre
- Simulation of soft tissue deformation in real-time using domain decomposition
- auteur
- Ryadh Haferssas, Pierre-Henri Tournier, Frédéric Nataf, Stéphane Cotin
- article
- 2019
- Resume_court
- Non-linear models used in dynamic simulations usually require the solution of multiple large and spa .....
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- titre
- Constrained Stochastic State Estimation for 3D Shape Reconstruction of Catheters and Guidewires in Fluoroscopic Images
- auteur
- Raffaella Trivisonne, Erwan Kerrien, Stéphane Cotin
- article
- 2019
- Resume_court
- Minimally invasive fluoroscopy-based procedures are the gold standard for diagnosis and treatment of .....
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