Journal articles
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- Elastic registration based on compliance analysis and biomechanical graph matching
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- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stéphane Cotin
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- Annals of Biomedical Engineering, 2020, 48, pp.447-462. ⟨10.1007/s10439-019-02364-4⟩
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- An automatic elastic registration method suited for vascularized organs is proposed. The vasculature .....
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- Position-based modeling of lesion displacement in Ultrasound-guided breast biopsy
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- Eleonora Tagliabue, Diego Dall’alba, Enrico Magnabosco, Chiara Tenga, Igor Peterlík, Paolo Fiorini
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- International Journal of Computer Assisted Radiology and Surgery, 2019, 14 (8), pp.1329-1339. ⟨10.1007/s11548-019-01997-z⟩
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- Purpose Although ultrasound (US) images represent the most popular modality for guiding breast biops .....
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- FiloGen: A Model-Based Generator of Synthetic 3D Time-Lapse Sequences of Single Motile Cells with Growing and Branching Filopodia
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- Dmitry V Sorokin, Igor Peterlik, Vladimír V Ulman, David Svoboda, Tereza Nečasová, Katsiarina Morgaenko, Lívia Eisellová, Lenka Tesařová, Martin Maška
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- IEEE Transactions on Medical Imaging, 2018, pp.1-12. ⟨10.1109/TMI.2018.2845884⟩
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- The existence of diverse image datasets accompanied by reference annotations is a crucial prerequisi .....
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- Biomechanics-based graph matching for augmented CT-CBCT
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- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stephane Cotin
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- International Journal of Computer Assisted Radiology and Surgery, 2018, 13 (6), pp.805-813. ⟨10.1007/s11548-018-1755-1⟩
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- Purpose: Augmenting intraoperative cone beam computed tomography (CBCT) images with preoperative com .....
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- Fast Elastic Registration of Soft Tissues under Large Deformations
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- Igor Peterlik, Hadrien Courtecuisse, Robert Rohling, Purang Abolmaesumi, Christopher Nguan, Stéphane Cotin, Septimiu E Salcudean
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- Medical Image Analysis, 2018, 45, pp.24-40. ⟨10.1016/j.media.2017.12.006⟩
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- A fast and accurate fusion of intra-operative images with a pre-operative data is a key component of .....
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- Intraoperative Biomechanical Registration of the Liver: Does the Heterogeneity of the Liver Matter?
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- Rosalie Plantefève, Igor Peterlik, Stéphane Cotin
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- Innovation and Research in BioMedical engineering, 2018, 39 (1), pp.18-25. ⟨10.1016/j.irbm.2017.10.005⟩
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- Background: Preoperative images such as computed tomography scans or magnetic resonance imaging cont .....
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- Non-rigid Contour-Based Registration of Cell Nuclei in 2D Live Cell Microscopy Images Using a Dynamic Elasticity Model
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- Dmitry V Sorokin, Igor Peterlik, Marco Tektonidis, Karl Rohr, Pavel Matula
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- IEEE Transactions on Medical Imaging, 2017, 37 (1), pp.173-184. ⟨10.1109/TMI.2017.2734169⟩
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- The analysis of the pure motion of subnuclear structures without influence of the cell nucleus motio .....
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- Patient-specific Biomechanical Modeling for Guidance during Minimally-invasive Hepatic Surgery
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- Rosalie Plantefève, Igor Peterlik, Nazim Haouchine, Stéphane Cotin
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- Annals of Biomedical Engineering, 2015
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- During the minimally-invasive liver surgery, only the partial surface view of the liver is usually p .....
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- Preoperative trajectory planning for percutaneous procedures in deformable environments
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- Noura Hamzé, Igor Peterlík, Stéphane Cotin, Caroline Essert
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- Computerized Medical Imaging and Graphics, 2015, 47, pp.16-28. ⟨10.1016/j.compmedimag.2015.10.002⟩
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- In image-guided percutaneous interventions, a precise planning of the needle path is a key factor to .....
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Conference papers
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- The effect of discretization on parameter identification. Application to patient-specific simulations
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- Nava Weingort Schulmann, Stéphane Cotin, Igor Peterlík
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- CMBBE 2019 - 16th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering, Aug 2019, New York (NY), United States
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- Identifying the elastic parameters of a finite element model from a dynamically acquired set of obse .....
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- Stochastic Correction of Boundary Conditions during Liver Surgery
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- Sergei Nikolaev, Igor Peterlik, Stéphane Cotin
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- CVCS 2018 - 9th Colour and Visual Computing Symposium 2018, NTNU: Norwegian University of Science and Technology, Sep 2018, Gjovik, Norway. pp.1 - 4, ⟨10.1109/CVCS.2018.8496720⟩
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- Boundary conditions play essential role in forming the predictive capacity of the biomechanical mode .....
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- Biomechanics-based graph matching for augmented CT-CBCT
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- Jaime Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stephane Cotin
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- IPCAI 2018 - 9th International Conference on Information Processing in Computer-Assisted Interventions, Jun 2018, Berlin, Germany
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- Purpose: Augmenting intraoperative cone beam computed tomography (CBCT) images with preoperative com .....
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- Automatic biomechanical graph matching CT-CBCT fusion
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- Jaime Garcia Garcia Guevara, Igor Peterlik, Marie-Odile Berger, Stéphane Cotin
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- Surgetica 2017, Nov 2017, Strasbourg, France
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- Image-guided hepatic surgery is progressively becoming a standard for certain interventions. However .....
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- Robust Automatic Graph-based Skeletonization of Hepatic Vascular Trees
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- Rosalie Plantefève, Samuel Kadoury, An Tang, Igor Peterlik
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- CIIV STENT 2017, Sep 2017, Québec, Canada
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- The topologies of vascular trees embedded inside soft tissues carry important information which can .....
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- Image-driven Stochastic Identification of Boundary Conditions for Predictive Simulation
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- Igor Peterlik, Nazim Haouchine, Lukáš Ručka, Stéphane Cotin
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- 20th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2017, Québec, Canada
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- In computer-aided interventions, biomechanical models reconstructed from the pre-operative data are .....
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- Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Motile Cells with Growing Filopodia
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- Dmitry V Sorokin, Igor Peterlik, Vladimír V Ulman, David Svoboda, Martin Maška
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- International Symposium on Biomedical Imaging, Apr 2017, Melbourne, Australia
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- The existence of benchmark datasets is essential to objectively evaluate various image analysis meth .....
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- Fast reconstruction of image deformation field using radial basis function
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- Lukáš Ručka, Igor Peterlík
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- ISBI2017 - International Symposium on Biomedical Imaging, Apr 2017, Melbourne, Australia
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- Fast and accurate registration of image data is a key component of computer-aided medical image anal .....
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- Face-based Smoothed Finite Element Method for Real-time Simulation of soft tissue
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- Andrea Mendizabal, Rémi Bessard Duparc, Huu Phuoc Bui, Christoph J Paulus, Igor Peterlik, Stéphane Cotin
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- SPIE Medical Imaging, Feb 2017, Orlando, United States
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- In soft tissue surgery, a tumor and other anatomical structures are usually located using the preope .....
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- 3D Physics-Based Registration of 2D Dynamic MRI Data
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- Raffaella Trivisonne, Igor Peterlik, Stéphane Cotin, Hadrien Courtecuisse
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- MMVR - Medicine Meets Virtual Reality, Apr 2016, Los Angeles, United States
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- We present a method allowing for intra-operative targeting of a specific anatomical feature. The met .....
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- Framework for augmented reality in Minimally Invasive laparoscopic surgery
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- Bruno Marques, Rosalie Plantefeve, Frédérick Roy, Nazim Haouchine, Emmanuel Jeanvoine, Igor Peterlik, Stéphane Cotin
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- HealthCom 2015, Oct 2015, Boston, United States. ⟨10.1109/HealthCom.2015.7454467⟩
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- This article presents a framework for fusing pre-operative data and intra-operative data for surgery .....
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