Publications HAL du labo/EPI opis;galen;galen-post;cvn

Journal articles

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Samy Ammari, Raoul Sallé de Chou, Corinne Balleyguier, Emilie Chouzenoux, Mehdi Touat, et al.. A Predictive Clinical-Radiomics Nomogram for Survival Prediction of Glioblastoma Using MRI. Diagnostics, MDPI, 2021, 11 (11), pp.2043. ⟨10.3390/diagnostics11112043⟩. ⟨hal-03424507⟩
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https://hal.sorbonne-universite.fr/hal-03424507/file/diagnostics-11-02043.pdf BibTex
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Samy Ammari, Alexandre Bône, Corinne Balleyguier, Eric Moulton, Émilie Chouzenoux, et al.. Can deep learning replace gadolinium in neuro-oncology?. Investigative Radiology, Lippincott, Williams & Wilkins, 2021, 57, pp.99 - 107. ⟨10.1097/rli.0000000000000811⟩. ⟨hal-03527628⟩
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https://hal.inria.fr/hal-03527628/file/2022_01_17__InvestigativeRadiology__AuthorCopy.pdf BibTex
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Samy Ammari, Raoul Sallé de Chou, Tarek Assi, Mehdi Touat, Emilie Chouzenoux, et al.. Machine-Learning-Based Radiomics MRI Model for Survival Prediction of Recurrent Glioblastomas Treated with Bevacizumab. Diagnostics, MDPI, 2021, 11 (7), pp.1263. ⟨10.3390/diagnostics11071263⟩. ⟨hal-03292019⟩
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https://hal.sorbonne-universite.fr/hal-03292019/file/diagnostics-11-01263-v2.pdf BibTex
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Samy Ammari, Stéphanie Pitre-Champagnat, Laurent Dercle, Emilie Chouzenoux, Salma Moalla, et al.. Influence of magnetic field strength on magnetic resonance imaging radiomics features in brain imaging, an in vitro and in vivo study. Frontiers in Oncology, Frontiers, 2021, 10, pp.541663. ⟨10.3389/fonc.2020.541663⟩. ⟨hal-03117688⟩
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Daniel Antunes, Jacques-Olivier Lachaud, Hugues Talbot. An Elastica-driven Digital Curve Evolution Model for Image Segmentation. Journal of Mathematical Imaging and Vision, Springer Verlag, 2021, 63 (1), pp.1-17. ⟨10.1007/s10851-020-00983-4⟩. ⟨hal-03144926⟩
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https://hal.archives-ouvertes.fr/hal-03144926/file/Antunes_etal_Digital_Elastica.pdf BibTex
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Enzo Battistella, Maria Vakalopoulou, Roger Sun, Théo Estienne, Marvin Lerousseau, et al.. COMBING: Clustering in Oncology for Mathematical and Biological Identification of Novel Gene Signatures. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Institute of Electrical and Electronics Engineers, 2021, pp.1-1. ⟨10.1109/TCBB.2021.3123910⟩. ⟨hal-03530265⟩
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https://hal-centralesupelec.archives-ouvertes.fr/hal-03530265/file/IEEE_transactions_on_bio_Hal.pdf BibTex
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Alienor Campredon, Enzo Battistella, Clémence Martin, Isabelle Durieu, Laurent Mely, et al.. Using chest CT scan and unsupervised machine learning for predicting and evaluating response to lumacaftor-ivacaftor in people with cystic fibrosis. European Respiratory Journal, European Respiratory Society, 2021, pp.2101344. ⟨10.1183/13993003.01344-2021⟩. ⟨hal-03539118⟩
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Abdulkadir Çelikkanat, Fragkiskos D Malliaros. Topic-aware latent models for representation learning on networks. Pattern Recognition Letters, Elsevier, 2021. ⟨hal-03420690v2⟩
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https://hal.archives-ouvertes.fr/hal-03420690/file/TNE_Pattern_Recognition_Letters_2021.pdf BibTex
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Guillaume Chassagnon, Maria Vakalopoulou, Enzo Battistella, Stergios Christodoulidis, Trieu-Nghi Hoang-Thi, et al.. AI-driven quantification, staging and outcome prediction of COVID-19 pneumonia. Medical Image Analysis, Elsevier, 2021, 67, pp.101860. ⟨10.1016/j.media.2020.101860⟩. ⟨hal-03133234⟩
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Guillaume Chassagnon, Maria Vakalopoulou, Alexis Régent, Mihir Sahasrabudhe, Rafael Marini, et al.. Elastic Registration–driven Deep Learning for Longitudinal Assessment of Systemic Sclerosis Interstitial Lung Disease at CT. Radiology, Radiological Society of North America, 2021, 298 (1), pp.189-198. ⟨10.1148/radiol.2020200319⟩. ⟨hal-03134510⟩
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Emilie Chouzenoux, Jean-Christophe Pesquet, Cyril Riddell, Marion Savanier, Yves Trousset. Convergence of Proximal Gradient Algorithm in the Presence of Adjoint Mismatch. Inverse Problems, IOP Publishing, 2021, 37 (6), pp.065009. ⟨hal-03136110⟩
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https://hal.archives-ouvertes.fr/hal-03136110/file/Chouzenoux_2021_Inverse_Problems_37_065009.pdf BibTex
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Patrick Combettes, Jean-Christophe Pesquet. Fixed Point Strategies in Data Science. IEEE Transactions on Signal Processing, Institute of Electrical and Electronics Engineers, 2021, 69, pp.3878-3905. ⟨10.1109/TSP.2021.3069677⟩. ⟨hal-03495546⟩
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Andrés Contreras, Juan Peypouquet. Forward-backward approximation of nonlinear semigroups in finite and infinite horizon. Communications on Pure & Applied Analysis, American Institute of Mathematical Sciences (AIMS) 2021, 20 (5), pp.1893-1906. ⟨10.3934/cpaa.2021051⟩. ⟨hal-03528849⟩
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Tassnim Dardouri, Mounir Kaaniche, Amel Benazza-Benyahia, Jean-Christophe Pesquet. Dynamic Neural Network for Lossy-to-Lossless Image Coding. IEEE Transactions on Image Processing, Institute of Electrical and Electronics Engineers, 2021, 31, pp.569-584. ⟨10.1109/TIP.2021.3132825⟩. ⟨hal-03526618⟩
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https://hal.archives-ouvertes.fr/hal-03526618/file/Accepted_IEEE_TIP_double_column_DFCN_LS.pdf BibTex
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Loubna El Gueddari, Chaithya Giliyar Radhakrishna, Emilie Chouzenoux, Philippe Ciuciu. Calibration-Less Multi-Coil Compressed Sensing Magnetic Resonance Image Reconstruction Based on OSCAR Regularization. Journal of Imaging, MDPI, 2021, 7 (3), pp.58. ⟨10.3390/jimaging7030058⟩. ⟨hal-03366158⟩
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Nicolas Gogin, Mario Viti, Luc Nicodème, Mickaël Ohana, Hugues Talbot, et al.. Automatic coronary artery calcium scoring from unenhanced-ECG-gated CT using deep learning. Diagnostic and Interventional Imaging, Elsevier, 2021, 102 (11), pp.683-690. ⟨10.1016/j.diii.2021.05.004⟩. ⟨hal-03500506⟩
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https://hal.archives-ouvertes.fr/hal-03500506/file/CAC_Data_challenge_GAMC_final_2304-em.pdf BibTex
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Trieu-Nghi Hoang-Thi, Maria Vakalopoulou, Stergios Christodoulidis, Nikos Paragios, Marie-Pierre Revel, et al.. Deep learning for lung disease segmentation on CT: Which reconstruction kernel should be used?. Diagnostic and Interventional Imaging, Elsevier, 2021, 102 (11), pp.691-695. ⟨10.1016/j.diii.2021.10.001⟩. ⟨hal-03539082⟩
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Thomas Hortholary, Claire Carrion, Emilie Chouzenoux, Jean-Christophe Pesquet, Claire Lefort. Multiplex‐multiphoton microscopy and computational strategy for biomedical imaging. Microscopy Research and Technique, Wiley, In press, ⟨10.1002/jemt.23712⟩. ⟨hal-03126396⟩
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https://hal.archives-ouvertes.fr/hal-03126396/file/MRT-20-196.R2_Proof_hi_21%2012%202020.pdf BibTex
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Yunshi Huang, Emilie Chouzenoux, Víctor Elvira. Probabilistic modeling and inference for sequential space-varying blur identification. IEEE Transactions on Computational Imaging, IEEE, 2021, 7, pp.531 - 546. ⟨hal-03225842⟩
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Nathalie Lassau, Samy Ammari, Emilie Chouzenoux, Hugo Gortais, Paul Herent, et al.. Integrating deep learning CT-scan model, biological and clinical variables to predict severity of COVID-19 patients. Nature Communications, Nature Publishing Group, inPress, 12 (634), ⟨10.1038/s41467-020-20657-4⟩. ⟨hal-03136018⟩
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Claire Lefort, Mathieu Chalvidal, Alexis Parenté, Véronique Blanquet, Henri Massias, et al.. FAMOUS: a fast instrumental and computational pipeline for multiphoton microscopy applied to 3D imaging of muscle ultrastructure. Journal of Physics D: Applied Physics, IOP Publishing, 2021, 54 (27), pp.274005. ⟨10.1088/1361-6463/abf8f2⟩. ⟨hal-03225997v2⟩
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https://hal.archives-ouvertes.fr/hal-03225997/file/JPhysD-126807.R1_Proof_hi.pdf BibTex
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Yingping Li, Samy Ammari, Corinne Balleyguier, Nathalie Lassau, Emilie Chouzenoux. Impact of Preprocessing and Harmonization Methods on the Removal of Scanner Effects in Brain MRI Radiomic Features. Cancers, MDPI, 2021, 13, ⟨10.3390/cancers13123000⟩. ⟨hal-03261617⟩
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https://hal.archives-ouvertes.fr/hal-03261617/file/cancers-13-03000.pdf BibTex
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Shaobo Luo, Yuzhi Shi, Lip Ket Chin, Paul Edward Hutchinson, Yi Zhang, et al.. Machine‐Learning‐Assisted Intelligent Imaging Flow Cytometry: A Review. Advanced Intelligent Systems, Wiley, 2021, 3 (11), pp.2100073. ⟨10.1002/aisy.202100073⟩. ⟨hal-03540960⟩
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https://hal.archives-ouvertes.fr/hal-03540960/file/Advanced%20Intelligent%20Systems%20-%202021%20-%20Luo%20-%20Machine%E2%80%90Learning%E2%80%90Assisted%20Intelligent%20Imaging%20Flow%20Cytometry%20%20A%20Review.pdf BibTex
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Shaobo Luo, Tarik Bourouina, Giovanni Chierchia, Hugues Talbot, Ai-Qun Liu, et al.. Deep learning‐enabled imaging flow cytometry for high‐speed Cryptosporidium and Giardia detection. Cytometry Part A, Wiley, 2021, ⟨10.1002/cyto.a.24321⟩. ⟨hal-03161362⟩
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Shaobo Luo, Yuzhi Shi, Lip Ket Chin, Yi Zhang, Bihan Wen, et al.. Rare bioparticle detection via deep metric learning. RSC Advances, Royal Society of Chemistry, 2021, 11 (29), pp.17603-17610. ⟨10.1039/D1RA02869C⟩. ⟨hal-03541059⟩
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Arthur Marmin, Marc Castella, Jean-Christophe Pesquet, Laurent Duval. Sparse signal reconstruction for nonlinear models via piecewise rational optimization. Signal Processing, Elsevier, 2021, 179, pp.107835. ⟨10.1016/j.sigpro.2020.107835⟩. ⟨hal-02972442v2⟩
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Aanchal Mongia, Sanjay Kr Saha, Emilie Chouzenoux, Angshul Majumdar. A computational approach to aid clinicians in selecting anti-viral drugs for COVID-19 trials. Scientific Reports, Nature Publishing Group, 2021, 11 (9047), ⟨10.1038/s41598-021-88153-3⟩. ⟨hal-02888874⟩
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Aanchal Mongia, Emilie Chouzenoux, Angshul Majumdar. Computational prediction of Drug-Disease association based on Graph-regularized one bit Matrix completion. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Institute of Electrical and Electronics Engineers, In press. ⟨hal-03465955⟩
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Thanh Xuan Nguyen, Giovanni Chierchia, O Razim, R Peletier, Laurent Najman, et al.. Object Detection with Component-Graphs in Multi-band Images: Application to Source Detection in Astronomical Images. IEEE Access, IEEE, 2021, 9, pp.156482-156491. ⟨10.1109/ACCESS.2021.3128519⟩. ⟨hal-03429058v2⟩
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https://hal.archives-ouvertes.fr/hal-03429058/file/IEEE_ACCESS_Journal_2021__Final.pdf BibTex
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Maria Papadomanolaki, Stergios Christodoulidis, Konstantinos Karantzalos, Maria Vakalopoulou. Unsupervised Multistep Deformable Registration of Remote Sensing Imagery Based on Deep Learning. Remote Sensing, MDPI, 2021, 13 (7), ⟨10.3390/rs13071294⟩. ⟨hal-03538150⟩
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https://hal.inria.fr/hal-03538150/file/remotesensing-13-01294.pdf BibTex
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Lazaros Papamanolis, Hyun Jin Kim, Clara Jaquet, Matthew Sinclair, Michiel Schaap, et al.. Myocardial Perfusion Simulation for Coronary Artery Disease: A Coupled Patient-Specific Multiscale Model. Annals of Biomedical Engineering, Springer Verlag, 2021, 49, pp.1432-1447. ⟨10.1007/s10439-020-02681-z⟩. ⟨hal-03036457v2⟩
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https://hal.archives-ouvertes.fr/hal-03036457/file/Papamanolis2020_Article_MyocardialPerfusionSimulationF.pdf BibTex
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Jean-Christophe Pesquet, Audrey Repetti, Matthieu Terris, Yves Wiaux. Learning Maximally Monotone Operators for Image Recovery. SIAM Journal on Imaging Sciences, Society for Industrial and Applied Mathematics, 2021, 14 (3), pp.1206-1237. ⟨hal-03087515v2⟩
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Julie Robic, Alex Nkengne, Benjamin Perret, Michel Couprie, Hugues Talbot, et al.. Clinical validation of a computer‐based approach for the quantification of the skin ageing process of women using in vivo confocal microscopy. Journal of the European Academy of Dermatology and Venereology, Wiley, 2021, 35 (1), ⟨10.1111/jdv.16810⟩. ⟨hal-03144931⟩
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Tirza Routtenberg, Alberto Carini, Emilie Chouzenoux, Piya Pal, José C. M. Bermudez, et al.. Fight the Pandemic: Highlights From the 2020 IEEE 5-Minute Video Clip Contest. IEEE Signal Processing Magazine, Institute of Electrical and Electronics Engineers, 2021, 38, 2, pp.138-143. ⟨10.1109/MSP.2020.3046230⟩. ⟨hal-03161830⟩
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Marion Savanier, Cyril Riddell, yves Trousset, Emilie Chouzenoux, Jean-Christophe Pesquet. Magnification-driven B-spline Interpolation for Cone Beam Projection and Backprojection. Medical Physics, American Association of Physicists in Medicine, In press, 48 (10), ⟨10.1002/mp.15179⟩. ⟨hal-03464469⟩
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Shalini Sharma, Víctor Elvira, Emilie Chouzenoux, Angshul Majumdar. Recurrent Dictionary Learning for State-Space Models with an Application in Stock Forecasting. Neurocomputing, Elsevier, In press. ⟨hal-03184841⟩
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Sagar Verma, Shikha Singh, Angshul Majumdar. Multi-label LSTM autoencoder for non-intrusive appliance load monitoring. Electric Power Systems Research, Elsevier, 2021, 199, pp.107414. ⟨10.1016/j.epsr.2021.107414⟩. ⟨hal-03294549⟩
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Conference papers

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Alexandre Bône, Samy Ammari, Jean-Philippe Lamarque, Mickael Elhaik, Émilie Chouzenoux, et al.. Contrast-enhanced brain MRI synthesis with deep learning: key input modalities and asymptotic performance. ISBI 2021 - International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. ⟨hal-03128023⟩
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https://hal.archives-ouvertes.fr/hal-03128023/file/ISBI_2021__VCE.pdf BibTex
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Joseph Boyd, Mykola Liashuha, Eric Deutsch, Nikos Paragios, Stergios Christodoulidis, et al.. Self-Supervised Representation Learning using Visual Field Expansion on Digital Pathology. 2021 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW), Oct 2021, Montreal, Canada. pp.639-647, ⟨10.1109/ICCVW54120.2021.00077⟩. ⟨hal-03448192⟩
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Mathieu Carriere, Frédéric Chazal, Marc Glisse, Yuichi Ike, Hariprasad Kannan. Optimizing persistent homology based functions. ICML 2021 - 38th International Conference on Machine Learning, Jul 2021, Virtual conference, United States. pp.1294-1303. ⟨hal-02969305v2⟩
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https://hal.inria.fr/hal-02969305/file/_ICML21__Optimizing_persistent_homology_based_functions.pdf BibTex
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Snehil Dahiya, Shalini Sharma, Dhruv Sahnan, Vasu Goel, Emilie Chouzenoux, et al.. Would Your Tweet Invoke Hate on the Fly? Forecasting Hate Intensity of Reply Threads on Twitter. SIGKDD 2021 - 27th Conference on Knowledge Discovery and Data Mining, Aug 2021, Singapore, Singapore. ⟨10.1145/3447548.3467150⟩. ⟨hal-03281567⟩
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Tassnim Dardouri, M. Kaaniche, A. Benazza-Benyahia, J.-C. Pesquet, G. Dauphin. A Neural Network Approach For Joint Optimization Of Predictors In Lifting-Based Image Coders. 2021 IEEE International Conference on Image Processing (ICIP), Sep 2021, Anchorage / Virtual, United States. pp.3747-3751, ⟨10.1109/ICIP42928.2021.9506737⟩. ⟨hal-03526467⟩
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Alexandre Duval, Fragkiskos D. Malliaros. GraphSVX: Shapley Value Explanations for Graph Neural Networks. European Conference on Machine Learning and Knowledge Discovery in Databases (ECML PKDD), Sep 2021, Bilbao, Spain. ⟨hal-03539183⟩
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https://hal.archives-ouvertes.fr/hal-03539183/file/GraphSVX_ECML_PKDD_2021.pdf BibTex
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Théo Estienne, Maria Vakalopoulou, Stergios Christodoulidis, Enzo Battistella, Théophraste Henry, et al.. Exploring Deep Registration Latent Spaces. DART in MICCAI 2021, the 24th International Conference on Medical Image Computing and Computer Assisted Intervention, Sep 2021, Strasbourg, France. pp.112-122, ⟨10.1007/978-3-030-87722-4_11⟩. ⟨hal-03524105⟩
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Jean-Baptiste Fest, Emilie Chouzenoux. Stochastic Majorize-Minimize Subspace Algorithm with Application to Binary Classification. EUSIPCO 2021 - 29th European Signal Processing Conference, Aug 2021, Dublin / Virtual, Ireland. ⟨hal-03275377⟩
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Mouna Gharbi, Emilie Chouzenoux, Jean-Christophe Pesquet, Laurent Duval. GPU-based Implementations of MM Algorithms. Application to Spectroscopy Signal Restoration. EUSIPCO 2021 - 29th European Signal Processing Conference, Aug 2021, Dublin / Virtual, Ireland. ⟨hal-03275427v2⟩
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Thomas Guilmeau, Emilie Chouzenoux, Víctor Elvira. Simulated annealing: a review and a new scheme. SSP 2021 - IEEE Statistical Signal Processing Workshop, Jul 2021, Rio de Janeiro, Brazil. ⟨hal-03275401⟩
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Kavya Gupta, Jean-Christophe Pesquet, Beatrice Pesquet-Popescu, Fragkiskos D. Malliaros, Fateh Kaakai. An Adversarial Attacker for Neural Networks in Regression Problems. IJCAI Workshop on Artificial Intelligence Safety (AI Safety), Aug 2021, Montreal/Virtual, Canada. ⟨hal-03527640⟩
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Kavya Gupta, Beatrice Pesquet-Popescu, Fateh Kaakai, Jean-Christophe Pesquet. A Quantitative Analysis Of The Robustness Of Neural Networks For Tabular Data. ICASSP 2021 - 2021 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), Jun 2021, Toronto, Canada. pp.8057-8061, ⟨10.1109/ICASSP39728.2021.9413858⟩. ⟨hal-03527634⟩
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Pooja Gupta, Jyoti Maggu, Angshul Majumdar, Emilie Chouzenoux, Giovanni Chierchia. ConFuse: Convolutional Transform Learning Fusion Framework For Multi-Channel Data Analysis. EUSIPCO 2020 - 28th European Signal Processing Conference, Jan 2021, Amsterdam / Virtual, Netherlands. ⟨hal-02943658⟩
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Surabhi Jagtap, Aurélie Pirayre, Frederique Bidard, Laurent Duval, Fragkiskos D. Malliaros. BRANet: Graph-based Integration of Multi-omics Data with Biological a priori for Regulatory Network Inference. 17th International Conference on Computational Intelligence Methods for Bioinformatics and Biostatistics (CIBB), Nov 2021, Online, Italy. ⟨hal-03425420⟩
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Surabhi Jagtap, Abdulkadir Çelikkanat, Aurélie Pirayre, Frederique Bidard, Laurent Duval, et al.. Multiomics Data Integration for Gene Regulatory Network Inference with Exponential Family Embeddings. EUSIPCO - 29th European Signal Processing Conference, Aug 2021, Dublin / Online, Ireland. ⟨hal-03336884⟩
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Charles A Kantor, Léonard Boussioux, Brice Rauby, Hugues Talbot. Over-MAP: Structural Attention Mechanism and Automated Semantic Segmentation Ensembled for Uncertainty Prediction. AAAI 2021 - 35th AAAI Conference on Artificial Intelligence, Feb 2021, Virtual, China. pp.15316-15322. ⟨hal-03541009⟩
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Charles A. Kantor, Marta Skreta, Brice Rauby, Léonard Boussioux, Emmanuel Jehanno, et al.. Geo-Spatiotemporal Features and Shape-Based Prior Knowledge for Fine-grained Imbalanced Data Classification. IJCAI 2021 - Workshop on AI for Social Good, Jan 2021, Tokyo, Japan. ⟨hal-03150686⟩
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https://hal.archives-ouvertes.fr/hal-03150686/file/IJCAI.pdf BibTex
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Othmane Laousy, Guillaume Chassagnon, Edouard Oyallon, Nikos Paragios, Marie-Pierre Revel, et al.. Deep Reinforcement Learning for L3 Slice Localization in Sarcopenia Assessment. Machine Learning in Medical Imaging @MICCAI, Sep 2021, Strasbourg, France. pp.317-326, ⟨10.1007/978-3-030-87589-3_33⟩. ⟨hal-03532954⟩
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Marvin Lerousseau, Marion Classe, Enzo Battistella, Théo Estienne, Théophraste Henry, et al.. Weakly Supervised Pan-Cancer Segmentation Tool. Medical Image Computing and Computer Assisted Intervention, Sep 2021, Stansbroug, France. pp.248-256, ⟨10.1007/978-3-030-87237-3_24⟩. ⟨hal-03539272⟩
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Marvin Lerousseau, Maria Vakalopoulou, Eric Deutsch, Nikos Paragios. SparseConvMIL: Sparse Convolutional Context-Aware Multiple Instance Learning for Whole Slide Image Classification. Machine Learning Research 156, Sep 2021, Strasbourg, France. ⟨hal-03539261⟩
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https://arxiv.org/pdf/2105.02726 BibTex
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Elie Leroy, Arthur Marmin, Marc Castella, Laurent Duval. Weight identification through global optimization in a new hysteretic neural network model. ICASSP 2021 - 46th International Conference on Acoustics, Speech and Signal Processing, Jun 2021, Toronto (online), Canada. pp.5315-5319, ⟨10.1109/ICASSP39728.2021.9413383⟩. ⟨hal-03227078⟩
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yingping Li, Emilie Chouzenoux, Benoit Charmettant, Baya Benatsou, Jean-Philippe Lamarque, et al.. Lightweight U-Net for Lesion Segmentation in Ultrasound Images. ISBI 2021 - IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. ⟨hal-03140737v2⟩
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Ségolène Martin, Emilie Chouzenoux, Jean-Christophe Pesquet. A Penalized Subspace Strategy for Solving Large-Scale Constrained Optimization Problems. EUSIPCO 2021 - 29th European Signal Processing Conference, Aug 2021, Dublin / Virtual, Ireland. ⟨hal-03275387⟩
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https://hal.archives-ouvertes.fr/hal-03275387/file/EUSIPCO_2021.pdf BibTex
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Leo Milecki, Sylvain Bodard, Jean-Michel Correas, Marc-Olivier Timsit, Maria Vakalopoulou. 3D Unsupervised Kidney Graft Segmentation Based on Deep Learning and Multi-Sequence MRI. IEEE ISBI 2021 - International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. ⟨hal-03141528⟩
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Ana Neacsu, Kavya Gupta, Jean-Christophe Pesquet, Corneliu Burileanu. Signal Denoising Using a New Class of Robust Neural Networks. EUSIPCO 2020 - 28th European Signal Processing Conference, Jan 2021, Amsterdam, Netherlands. pp.1492-1496, ⟨10.23919/Eusipco47968.2020.9287630⟩. ⟨hal-03115064⟩
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George Panagopoulos, Fragkiskos D. Malliaros. Influence Learning and Maximization. 21st International Conference on Web Engineering (ICWE), May 2021, Biarritz, France. ⟨hal-03539200⟩
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Marion Savanier, Emilie Chouzenoux, Jean-Christophe Pesquet, Cyril Riddell, yves Trousset. Proximal Gradient Algorithm in the Presence of Adjoint Mismatch. EUSIPCO 2020 - 28th European Signal Processing Conference, Jan 2021, Amsterdam (virtual), Netherlands. ⟨hal-02943659v2⟩
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Wen Tang, Emilie Chouzenoux, Jean-Christophe Pesquet, Hamid Krim. Deep transform and metric learning networks. ICASSP 2021 - IEEE International Conference on Acoustics, Speech and Signal Processing, Jun 2021, Toronto Virtual, Canada. ⟨hal-03281571⟩
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Matthieu Terris, Audrey Repetti, Jean-Christophe Pesquet, Yves Wiaux. Enhanced convergent PnP agorithms for image restoration. 2021 IEEE International Conference on Image Processing (ICIP), Sep 2021, Anchorage, United States. pp.1684-1688. ⟨hal-03497818⟩
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Vlad Vasilescu, Ana Neacsu, Emilie Chouzenoux, Jean-Christophe Pesquet, Corneliu Burileanu. A Deep Learning Approach for Improved Segmentation of Lesions Related to Covid-19 Chest CT Scans. ISBI 2021 - IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. ⟨hal-03188444⟩
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Sagar Verma, Jean-Christophe Pesquet. Sparsifying Networks via Subdifferential Inclusion. ICML 2021 - Thirty-eighth International Conference on Machine Learning, Jul 2021, Virtual, France. ⟨hal-03294543⟩
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Sagar Verma, Akash Panigrahi, Siddharth Gupta. QFabric: Multi-Task Change Detection Dataset. EARTHVISION 2021 Workshops - Large Scale Computer Vision for Remote Sensing Imagery: in conjunction with the Conference on Computer Vision and Pattern Recognition (CVPR 2021), Jun 2021, Virtual, France. ⟨hal-03294534⟩
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Jingwei Zhang, Ke Ma, John van Arman, Rajarsi Gupta, Joel Saltz, et al.. A Joint Spatial and Magnification Based Attention Framework for Large Scale Histopathology Classification. CVMI, Jun 2021, Nashville, United States. ⟨10.1109/CVPRW53098.2021.00418⟩. ⟨hal-03539240⟩
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Book sections

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Maria Vakalopoulou, Stergios Christodoulidis, Mihir Sahasrabudhe, Nikos Paragios. Deep Learning for the Earth Sciences. Deep Learning for the Earth Sciences: A Comprehensive Approach to Remote Sensing, Climate Science, and Geosciences, Wiley, 2021, ⟨10.1002/9781119646181.ch9⟩. ⟨hal-03539417⟩
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Poster communications

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Claire Lefort, Mathieu Chalvidal², Alexis Parenté, Véronique Blanquet, Henri Massias, et al.. FAMOUS pipeline: multiphoton microscopy and computational strategy for 3D imaging of biomedical sample. PSB Symposium "Frontiers in Bioimaging", Jul 2021, On line, France. ⟨hal-03280626⟩
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Claire Lefort, Mathieu Chalvidal, Alexis Parente, Véronique Blanquet, Henri Massias, et al.. Deep-3D-multiphoton imaging of whole biological structures with a computational assistance and the pipeline FAMOUS. Physics and Biological Systems 2021, Jun 2021, Grenoble, France. ⟨hal-03274262⟩
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Theses

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Enzo Battistella. High Dimensional Graph Theoretical Approaches for Various Omics Data. Statistics [math.ST]. Université Paris-Saclay, 2021. English. ⟨NNT : 2021UPASL047⟩. ⟨tel-03409196⟩
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Abdulkadir Celikkanat. Graph Representation Learning with Random Walk Diffusions. Neural and Evolutionary Computing [cs.NE]. Université Paris-Saclay, 2021. English. ⟨NNT : 2021UPASG030⟩. ⟨tel-03369983⟩
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Théo Estienne. Deep learning-based methods for 3D medical image registration. Medical Imaging. Université Paris-Saclay, 2021. English. ⟨NNT : 2021UPASG055⟩. ⟨tel-03547494⟩
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Preprints, Working Papers, ...

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Emilie Chouzenoux, Cecile Della Valle, Jean-Christophe Pesquet. Inversion of Integral Models: a Neural Network Approach. 2021. ⟨hal-03243257⟩
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https://hal.archives-ouvertes.fr/hal-03243257/file/FBResNet_v1.pdf BibTex
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Thomas Guilmeau, Alain Rapaport. Singular arcs in optimal periodic control problems with scalar dynamics and integral input constraint. 2021. ⟨hal-03103030⟩
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https://hal.inrae.fr/hal-03103030/file/Periodic_control___singular_arcs__scalar_dynamics.pdf BibTex
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Jean-Yves Tourneret, Adrian Basarab, Nora Leïla Ouzir, Qi Wei. Sparse representations and dictionary learning: from image fusion to motion estimation. 2021. ⟨hal-03130465⟩
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Sagar Verma. A Survey on Machine Learning Applied to Dynamic Physical Systems. 2021. ⟨hal-03120225⟩
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https://hal.archives-ouvertes.fr/hal-03120225/file/lit_rev_physics.pdf BibTex
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Farshad G. Veshki, Nora Leïla Ouzir, Sergiy A Vorobyov, Esa Ollila. Coupled Feature Learning for Multimodal Medical Image Fusion. 2021. ⟨hal-03130475⟩
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Mario Viti, Hugues Talbot, Nicolas Gogin. Coronary Plaque Localization and Characterization using Self-Attention Tree-Graph embeddings. 2021. ⟨hal-03500460⟩
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https://hal.archives-ouvertes.fr/hal-03500460/file/coronary_plaque_localization_a.pdf BibTex